Oncorhynchus mykiss (rainbow trout): 110535338
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Entry
110535338 CDS
T07259
Name
(RefSeq) LOW QUALITY PROTEIN: vascular endothelial growth factor receptor 1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04020
Calcium signaling pathway
omy04510
Focal adhesion
omy04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110535338
04020 Calcium signaling pathway
110535338
09133 Signaling molecules and interaction
04518 Integrin signaling
110535338
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110535338
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
omy01001
]
110535338
Enzymes [BR:
omy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
110535338
Protein kinases [BR:
omy01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
110535338
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
VEGFR1-3_N_Ig-like
Pkinase
I-set
VEGFR-1-like_Ig-like
Ig_VEGFR-1-like_5th
ig
Ig_2
V-set
VEGFR-2_TMD
Ig_PDGFR_d4
Ig_4
Motif
Other DBs
NCBI-GeneID:
110535338
NCBI-ProteinID:
XP_036792539
LinkDB
All DBs
Position
11:15375660..15478222
Genome browser
AA seq
1953 aa
AA seq
DB search
MICFIFMVLCGLSGSALAKGKVDREPKGKFSVPVLDVKSRQLVLEANQTLTIHCRGRWEL
SWVFPGGVARDKESVQLEDSRCGRQSQHYCSQLIISSAQAQHTGSFRCRYSQRTRRQSAV
YIYVTDRQRPFVEEQNNSPDVVYIKESQPLVFPCRVTHPDATVSLVKFPDRELTPDQRNI
VWNSRQGFLIRSPTYFYIGLFSCKTSVNGTTHSLSYLTHRQVNKIMEVYLNSTSPVQTLQ
GDSLAINCTVTAEWNSRVSISWDYPGQVNRAAIISRRIMASKTHMVFYSILSIPKLHRSD
RGLYICRVTSGPVSRETNVSVTVYDRPYIRLTPRQGAVVEAHAGQKSYRLSPKLRAFPAP
EIIWLKDGKVAAEQCSRYHVDGNSLVIRDVAKEDAGKYTILVGIQEHRLYQNLTLSLVVN
VSPGIGEKAVSLQDAGSVPQGSRQALHCSSHGVPPPHIAWLWHPCPPKGLCLCPYSSSLW
SLVRERAPSTSTQNHIXTHRQEVLQGKNKTVGILMVAEVFVSRVYRCIASXNELDMSFYI
TDVPGGFDVKQEEELREGGDLTCVANKQLYTKLSWQLVTDTAEPSNLSHVIPLIIIIINI
NITITHTHEEEDTMALPTMPHLQAPSQGQRNNQPIRHYSASGSVTLSCLAHGVPHPLITW
YKDQHSLLQDSGKIHSGTLHIDRITVKEQGLYTSQATNERGSAVGSTYIWVQNSSEGLSL
EILTLTCTCLVATLFWLLFTLFIRKLKQPFISQAKAEYLSIILDPDKGPPEEXCDRLQYD
TSQWEFPETASNWESLDHEAFGKVMQVSAFGIYNSTGYGTVAVKMLKGVLEGKQCTPNGV
LEGKQCAPNGVLEGKQCTPNGVLEGKQCTPNGVLEGKQCTPNGVLEGKQCTPNGVLEGKQ
CAPNGVLEGKQGSGFRQSHPAACVWGAAGALQGASGSRLLQLLEAALLLLFARCDGNASQ
PQGDSHRAHCITSLEGRLCTLSETHLNGSGPTRLEVPAGQRLLITMQSLPGDPVCSWSRG
ADPKRRGYSLTILQTHVSDSGEYTFSCERGGINSSLTLSLLVVPLLRLPTKPQLKFIPGK
RGFLPDYQCSSEGNPKPRIKWFNNLDKTGKGNDGTDIPSTIKERANNKEKSKNYYRTTVM
CCASNSQGEVCSQLYDYDLDRASGEDDEAPEITVSPGQPLLLSCRQKENSTTQWLPDNQV
SIHQLTYKEIYMTYLFIESVTVNHSGIYTCRGNKNKVKSTHVQVLEKGFISIDQLNESST
ISAQEKPGFCLRALVSSHPLLRCHWLGPDSRQTQCPEPTRLWKSRTLELCNTEPGEYQLH
LEAGELNLTKTLSLCVAGTPTPSLLQNGDNITCETNTPLPFKLTWSSCSLTNDSCQSESA
AWKEIPAPPPKLSDSDQFCHKRILSTRDSTEVGDFVKCCITNSVHSQSHCSETLFNIQFK
SVPPASSQLLLKVSSLVLFLALMLVSLALLYFIRKKKPQYQSQLQMIQMVGPNDNDYIYI
NFKDFQYDQKWEFPRENLELGKELGSGAFGMVLQATAYGISKPGVSLQVAVKMLKEKHET
VEKEALMSELKMLTHIGQHANIVNLLGACTGSGPTYLIFQYCRNGDLLNYLKNNRELYHK
SLTDAFTRDRFSRLYHNLPKRSSSEFQRPVDSIYIPMSPTTTRGQESIALISLNSSPMNT
SGGPGIYEELNELQEEEEEEEEEEEALTYDDLLSFSYQVAKGMDFLSSKHCIHRDLAARN
VLVTQGGLVKIGDFGLARDIDNDSNYVVRGNVRLPVKWMAPESIFQGMYTMQSDVWAYGI
LLWEVFSLGVTPYPGIKVDNNFYVMIERGFKMEQPYYASESVYSIMCKCWALEPRDRPHF
SKLVAFMDDQLADMEEKLYHNILDKRCSHVLYQNAPVKSDLSALAKEKGHQAQSQNQYCK
THSTGEAPTTTTTTLSDRVAMETDGDNPLKPCQ
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atgatttgctttatcttcatggttctatgtggattgtctggcagtgcgcttgcaaaaggt
aaagtggatagggagcctaaggggaagttcagtgttcctgttctggatgtgaagagtcga
cagctggtcctggaggccaaccagacgctgacgatccactgcaggggtcggtgggagctg
tcgtgggtgttccctggaggtgtggccagagataaagagagtgtgcaattggaggattct
cgctgtgggaggcagagccagcattactgcagccaactgattattagctcagcccaggcc
cagcacacaggatcgttccggtgtcggtacagccagcggacccgcaggcagagtgctgtc
tacatctatgtcacagacagacagcggccatttgtggaggagcagaataacagtccagac
gtggtgtatatcaaggagagccagcctctggtcttcccctgtagggtcacccaccctgac
gccaccgtgtcattggtcaagttccctgaccgtgagttgaccccagaccagaggaacata
gtgtggaacagcagacagggcttcctcatccgcagtcccacctacttctacatcggcctg
ttctcctgcaagacctctgtcaacgggaccacacactccctcagttacctcacacacaga
caagtgaataagattatggaggtgtatctgaacagtactagtcccgtccagactttacag
ggggacagtctggccatcaactgcactgtcactgcagagtggaacagcagagtgtccatc
agctgggactaccctgggcaggtaaaccgggcagccataattagtaggcgtatcatggcc
agtaaaactcacatggtgttctacagtattctgtccatccctaaactccaccgctctgac
agagggctctatatctgccgagtgaccagtggaccggtcagccgagagactaacgtgtca
gtcacagtctacgaccgtccgtatatccgtctgacacccagacaaggggcggtagtggag
gctcatgcaggacagaagtcctaccgactctcccccaaactacgggccttccctgcccca
gagatcatctggttgaaggatgggaaggtagcagcagaacagtgttcccgttaccatgtg
gacgggaattccctggtgatccgggatgtggcgaaggaggatgcagggaagtacactatc
ctggtgggaatccaggagcacagactctaccagaacctaacgctctctctggtggtcaac
gtgagtccagggataggggagaaggcggtgtccttgcaggacgcaggtagtgtcccgcag
ggcagcagacaagccctgcactgcagctcccacggagtcccccctcctcacatcgcctgg
ctctggcacccctgcccccccaaaggcctgtgtctgtgtccttactcctcctcactatgg
agcttggtgagagagagggcacccagcacgtccacacagaaccacatcnctacacacaga
caggaagtgctccaggggaagaataagaccgtggggattttgatggttgctgaggtgttt
gtatccagagtgtatcgctgtattgcctcanagaacgaactggacatgtccttttatatt
acagatgtcccaggaggcttcgatgtgaaacaggaggaggagctaagagagggaggagac
ctcacttgcgtagccaataaacaactgtacaccaagttgtcatggcaactggtgactgac
acagcagagccctctaacctctcacacgtgatccctctgatcatcatcatcatcaacatc
aacatcactataacacatacacacgaggaagaggacacaatggcacttcccacaatgcca
catttacaggccccttcacagggccagaggaacaatcagccaatcagacactactctgcc
agtggttcagtgacactcagctgccttgcccacggcgtgccacaccccctcatcacatgg
tacaaggaccaacactctcttctgcaggactcaggtaagatacacagcgggaccctccac
attgaccgaatcacagtgaaggaacagggtctgtacaccagccaggccaccaatgagaga
ggctctgctgtgggctccacctacatctgggttcagaactcgtcagagggcctgtctctg
gagatccttactctcacctgtacctgtctggtggccactctcttctggctgctgtttaca
ctcttcatacgtaaactaaaacagccatttatctctcaggcaaaggcagagtacctgtca
atcatcctggacccggacaaggggcctccggaggagtagtgtgatagactacagtacgac
accagccaatgggagttcccagagactgcctcgaactgggaaagtctggaccatgaggcc
tttgggaaggtcatgcaggtgtctgcctttggcatctacaactctacaggctacggaact
gtggctgtcaagatgctcaaaggtgtcctggagggcaagcagtgtacacctaatggtgtc
ctggagggcaagcagtgtgcacctaatggtgtcctggagggcaagcagtgtacacctaat
ggtgtcctggagggcaagcagtgtacacctaatggtgtcctggagggcaagcagtgtaca
cctaatggtgtcctggagggcaagcagtgtacacctaatggtgtcctggagggcaagcag
tgtgcacctaatggtgtcctggagggcaagcagggttcagggttcaggcagtcccacccc
gctgcctgtgtgtggggggcggcaggggcgctacagggggccagtggcagccgcctgctg
caactcctggaagctgcgctcctgttgctgttcgcccgttgtgatggaaacgcgtcgcag
cctcagggagactcacatcgagcgcactgtatcaccagcctggagggacggttgtgtact
ctgtctgaaacccatctgaatggttctggtcctaccagactagaggtccctgctggacag
aggctcctgatcaccatgcagagcctcccaggagaccctgtctgcagctggagccgtgga
gctgacccaaaaagaaggggctattccttgaccatactacagacacatgtgagtgattct
ggagagtacacattcagctgtgagagaggcgggatcaactcctctctgaccctctctcta
ctggtcgtacctctgctaagacttcccacaaaaccacagctgaaatttatccctgggaaa
agaggcttcttaccagactatcagtgttcttcagagggaaaccctaaacccaggatcaaa
tggttcaacaaccttgacaagactggaaaaggtaatgatgggacagacattccctctacg
atcaaagagagggctaacaacaaagagaaaagtaaaaattactacaggacaacagttatg
tgctgtgctagcaattctcagggagaggtgtgttctcaactatatgattacgatctggac
cgtgccagtggtgaggatgatgaggctccagagatcactgtgagtcctgggcagcccctg
ctgctcagctgtcggcagaaagagaacagcaccacacagtggctgcctgacaaccaagtc
tccatacatcaactcacatataaagaaatatatatgacctacctgttcattgagtcggtg
acagtgaaccacagtggaatctatacatgccgaggcaacaagaacaaggtcaaatccacc
catgtccaggtcctggagaagggcttcatttccatcgaccagctgaatgagagcagtacc
atctcagcccaggagaagccagggttctgtctgcgggccctggtctcctcacaccctctc
ctacgctgccattggctgggcccggacagcagacagacccagtgccctgagcccacacgg
ctctggaagagcaggactctggagttgtgtaacacagagccaggagagtaccagttacac
ctggaggctggggagctgaacctcacaaagaccctctctctgtgtgtggcaggtacaccc
acccccagtctcttacagaatggagacaatatcacctgtgaaaccaacaccccccttccc
ttcaaactcacctggagctcctgctctttgaccaatgacagctgtcagtcagagtctgca
gcctggaaggagatccctgccccacccccgaagctctctgactcagaccagttctgtcat
aagaggatcctcagtaccagggacagtaccgaggtgggggactttgtcaagtgctgcatc
acaaactctgtccactcacagtctcactgcagtgagacactgttcaacatacaatttaaa
tctgttccaccagcctcctctcaactcctcctgaaagtgtccagtctggtcctgttcctg
gctttgatgctggtcagcctggcgctgctctacttcatcaggaagaagaaaccccagtac
cagagtcagctgcagatgatccagatggtagggcctaatgacaacgactacatctacatc
aacttcaaagacttccagtatgaccagaaatgggagttccccagagagaacctggagctg
gggaaggagctgggctctggggcctttggcatggtgcttcaggctacagcctacggcatc
agcaagccaggagtctccctgcaggtggctgtcaagatgctgaaagagaagcatgagaca
gtagagaaggaggctctgatgtcagagctgaagatgctgactcacatcggacagcatgcc
aacatcgtcaacctgctgggggcatgcactggctcagggcccacgtacctgatatttcag
tactgccgtaacggggacctgctgaactacctgaagaacaacagagagctctaccacaag
tctctgacagacgccttcaccagggaccgcttcagcagactttaccacaacctgcccaag
aggagctccagtgagttccagaggccagtggacagcatatacatccccatgtcccccacc
accactagagggcaagagagtattgccctgatcagcctcaactcttctcccatgaacacc
tctggtggtccagggatctatgaggagttaaatgagctgcaggaggaggaggaggaggag
gaggaggaggaggaggcgctgacttacgacgacctgctcagcttctcctatcaggtggcc
aagggcatggacttcctgtcctccaaacactgtatccatcgtgaccttgctgccaggaac
gtgttggtgactcagggtggactagtaaagatcggggactttggactggcccgggacatc
gacaatgactccaactacgtagtgagaggaaatgtgcgtctgccagtgaagtggatggct
ccagagagtatcttccaggggatgtacaccatgcagagcgatgtctgggcctatggtatc
ctgctgtgggaggtcttctctctgggtgtgaccccctacccagggataaaggtggacaac
aacttctatgtgatgatagagagaggttttaagatggagcagccgtactacgctagtgaa
tctgtgtattcgatcatgtgtaagtgctgggccttggagcctcgggaccgccctcacttc
tccaagctggtggccttcatggatgaccaactggccgacatggaggagaagctctaccat
aacatcctggacaagcgctgcagtcatgtgttataccagaatgcacctgtgaaatctgat
ctctcagccttggccaaagaaaagggtcatcaagcacagtcacagaaccaatactgcaag
acccactccactggagaggccccaacaacaaccaccacaacactgtctgacagggttgcc
atggagactgatggtgacaatcctctgaaaccatgtcagtga
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integrated database retrieval system
