Oncorhynchus mykiss (rainbow trout): 110535813
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Entry
110535813 CDS
T07259
Name
(RefSeq) RING finger and CHY zinc finger domain-containing protein 1 isoform X1
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04115
p53 signaling pathway
omy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110535813
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
110535813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110535813
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110535813
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110535813
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CHY
zinc_ribbon_6
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_UBOX
Prok-RING_4
zf-RING_11
zf-RING_4
zf-C3HC4_3
DUF8149
Motif
Other DBs
NCBI-GeneID:
110535813
NCBI-ProteinID:
XP_021476793
Ensembl:
ENSOMYG00000030274
LinkDB
All DBs
Position
11:49218029..49235905
Genome browser
AA seq
467 aa
AA seq
DB search
MFADRQKYHRRRMASLVGCEHYVRRCLLKAPCCGKAYVCRLCHDAEEDHQMDRFLVKEVQ
CSVCTTVQQAQQTCVECNVTFGEYYCDICHLFDKDKKQYHCQPCGICRIGPREKYFHCEK
CNLCLAGDLRGNHKCVENVSRQNCPVCMEDIHTSRIGAQILPCGHLLHKTCFDDMVQTGA
YRCPLCMHSAWNMEHNWEQMDKEISQSPMPTEYQDATVKAPCCGKAYVCRLCHDAEEDHQ
MDRFLVKEVQCSVCTTVQQAQQTCVECNVTFGEYYCDICHLFDKDKKQYHCQPCGICRIG
PREKYFHCEKCNLCLAGDLRGNHKCVENVSRQNCPVCMEDIHTSRIGAQILPCGHLLHKT
CFDDMVQTGAYRCPLCMHSAWNMEHNWEQMDKEISQSPMPTEYQDATVKIICNDCQTHCM
VPFHVLGMKCSGCGSYNTAQNGGLIRQSREPQPQEPEQQPQSPLPEP
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcggaccgccaaaaataccatagacgaagaatggcttctctagttggatgtgaa
cattacgtgcgccgttgtttgttgaaagctccgtgttgtggtaaagcatacgtttgtcgc
ctgtgccatgacgctgaagaggaccatcaaatggaccgcttcctggtcaaagaagtgcag
tgctcagtctgcacaacagtacaacaggcacaacaaacttgcgtggagtgtaatgtgacc
tttggggaatattactgtgatatttgtcacctgtttgataaagacaagaagcagtatcac
tgtcagccctgtggaatttgcaggatcggaccaagggagaaatacttccactgtgagaag
tgcaatctctgtttagcaggagatctaagaggaaatcacaagtgtgttgaaaatgtttca
agacagaactgcccagtgtgtatggaggatatccacacatccagaataggagcccaaatt
cttccatgtggccatcttctacacaaaacatgctttgatgacatggtccaaacaggtgcg
tatcgatgcccactctgtatgcactctgcttggaatatggagcacaactgggagcagatg
gacaaggagatatctcagtcacccatgcccactgaataccaggatgccactgtgaaggct
ccgtgttgtggtaaagcatacgtttgtcgcctgtgccatgacgctgaagaggaccatcaa
atggaccgcttcctggtcaaagaagtgcagtgctcagtctgcacaacagtacaacaggca
caacaaacttgcgtggagtgtaatgtgacctttggggaatattactgtgatatttgtcac
ctgtttgataaagacaagaagcagtatcactgtcagccctgtggaatttgcaggatcgga
ccaagggagaaatacttccactgtgagaagtgcaatctctgtttagcaggagatctaaga
ggaaatcacaagtgtgttgaaaatgtttcaagacagaactgcccagtgtgtatggaggat
atccacacatccagaataggagcccaaattcttccatgtggccatcttctacacaaaaca
tgctttgatgacatggtccaaacaggtgcgtatcgatgcccactctgtatgcactctgct
tggaatatggagcacaactgggagcagatggacaaggagatatctcagtcacccatgccc
actgaataccaggatgccactgtgaagatcatatgtaatgactgccaaacccactgcatg
gtgcctttccatgttctgggaatgaagtgcagtggttgtgggtcctacaacacagcacag
aatgggggactgatacggcagtcccgggaaccacagccccaggagccagagcagcagccc
cagtccccattgccagaaccatag
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