Oncorhynchus mykiss (rainbow trout): 110536169
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Entry
110536169 CDS
T07259
Name
(RefSeq) DNA polymerase kappa isoform X1
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
110536169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omy03400
]
110536169
Enzymes [BR:
omy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
110536169
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
110536169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
zf-C2H2_12
Motif
Other DBs
NCBI-GeneID:
110536169
NCBI-ProteinID:
XP_021477445
Ensembl:
ENSOMYG00000019391
LinkDB
All DBs
Position
11:61787232..61801822
Genome browser
AA seq
973 aa
AA seq
DB search
METGGTSSSGEGFLSRMALNDNKAGMEGLDRDKINKIIMKFSKGSRFYENEMKKEQQVNQ
RIERMMLQKAHITEQQLSKAQTQVENMTFDLERVRDLSRVIVHVDMDAFYAAVETRDCPD
LKDKPMAVGSMSMLTTSNYHARKFGVRAAMPGFIAKKLCPNLVIVPTNFDKYRAVSAEVQ
EIFADYDPHFLPMSLDEAYLDISEHLEQRRVWPEALRTHRLRTNDTGTATSVSVPVEEQG
DGLQETVEGLSPVLFEDSPSSSSCPFLQDAPGGGAGGDVMVFGTCAEEAVREMRFRIEQK
TSLTASAGIAPNMMLAKVCSDKNKPNGQYRLPSNRQAVMVFIQDLPVRKVSGIGNVTEKM
LGALGITSCIHLGQEMALLALLFSETAWHHFLEISLGLGSTHIERDGERKSMSTERTFGE
MVALEEQFSLCRQLCQDLAQDLQKEALRGKTVTLKLKNVNFEVKTRAWTLPCAVATSDEL
FAVAKDLLKTEIDNVSPQPLRLRLMGIRVSSFVRADDKKPQQKSIVGFLQQGRADSSSPS
QISSHKPVKEHPPKPPGQTQPFPCPSLVQQSQGQEDHPWVPSWGGVEVGRTGEQQQSFFQ
KARAQRLRLQAEREDPPEDGKWNVLETRLGPTSSATKPKQTQTPIQKNPNTSAETHFTMS
ALTAPDNMTHAPTASSTEAHVSTSLYWSTEPGTDSLTCPVCFREVNTTDLTVFNRHVDQC
LSGVPMEHNIHTDTELERGSSVCEEEVEKEREGEIEKEIAEGERRREEGLMEKGRDPLSR
CMLDSLGLRLDSSAGDNKGLLLYETSTTNISLNAVGLNPVCLNTCPNGGVSIPRVTDPNI
LKGSSQSDPRIRPLSPGGPRPMTTPKVESHDPREPALTCPVCQVTQDTDNLTLFNRHVDL
CLNQEVLHELEGLASVDCTTHNATPAAHKEREQPLRRAPQKGKSKRRGSSPPPPSKKVKA
LGPARNTIDKFFR
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggagactggggggacctcctccagtggggagggcttcctctccagaatggccctcaac
gacaacaaggctggaatggagggccttgacagggacaagataaacaagatcatcatgaag
ttctccaagggctccaggttctatgagaacgagatgaaaaaggaacagcaggtgaaccag
cgcattgagaggatgatgctgcagaaagcacacatcactgagcaacagttgagcaaagca
caaacacaggtggaaaatatgacctttgacctggagagggttcgtgacttgagccgtgtt
attgtgcacgtggatatggatgccttctacgctgcggtggagacgagagactgtcctgac
ctgaaggacaaacccatggccgtgggctctatgagcatgctgacaacttccaactaccat
gcaaggaagtttggggtccgtgccgccatgcctggcttcatcgcgaagaagctctgccca
aacctggttattgttccaaccaactttgacaaatacagagcagtgagcgctgaagtccaa
gagatctttgcagactatgaccctcacttccttcccatgagtctggacgaggcctacctg
gacatcagtgagcacctggagcagaggagggtctggccagaggccctgcgtacccaccgt
ctccggaccaacgacactgggacagctacatccgtgtcagtgccagttgaggagcagggt
gatggcctacaggagacagtagagggtctgtctcctgtcctgtttgaggacagccccagc
tcctcctcctgcccctttctgcaggatgctcctgggggcggggctgggggagacgtgatg
gtgtttgggacctgtgccgaggaggcggtgagagagatgcgcttccgcatcgagcagaaa
acctcacttactgccagcgcaggcattgccccaaacatgatgctggccaaggtgtgtagt
gataagaacaaacccaacggccagtacagactcccctctaaccgacaggctgtcatggta
ttcatacaggacctgccagtccggaaggtatcaggcattgggaacgtgacagagaagatg
ctgggagctctaggtatcaccagctgtatccatcttggccaggagatggcgctgctggcc
ttgctgttctctgagacagcctggcaccacttcctcgaaatctccctaggcttgggctcc
acacacatcgagagggacggggagagaaaaagcatgagcacagagaggacatttggagag
atggttgcattagaggagcagttctctctgtgcaggcagctgtgtcaagacctggctcag
gacctgcagaaggaggctctccggggcaagacagtgacgttgaagcttaaaaatgtcaac
tttgaggtgaaaaccagagcgtggacattgccgtgtgccgttgctacgagtgacgagctc
tttgctgtcgctaaggacttgctgaagactgagattgacaacgtcagcccccagccactg
agactgaggctcatgggcattcgagtttccagctttgtcagagctgacgacaagaaaccc
cagcagaagagcattgtgggattccttcagcaaggcagggctgactccagtagcccctca
cagatctcctcccacaagcctgtgaaagagcatccacctaagcctccaggccagacccag
ccctttccctgcccttccctggtacagcagagccaggggcaggaggatcacccctgggta
cccagctggggaggagtggaggtggggaggactggggagcagcagcagtccttcttccaa
aaagctcgcgcccagaggctgcggctgcaagctgagagagaggacccaccagaggatgga
aagtggaacgtcttagagaccagactgggcccaacctcatcagccaccaagcccaaacag
acacagacacccattcagaagaatccaaatacatcagcagagacacacttcacgatgagt
gcattgacagctcctgacaacatgacacatgcacctacagccagcagcacagaggcacat
gtgtctacttcattgtactggtccacagagccagggacagacagtctgacctgccctgtg
tgcttcagggaggtgaacaccacagacctgacagtcttcaacagacatgttgaccagtgt
ctcagtggggttcctatggagcacaacattcacacagacacagaactagagagaggctcc
agtgtctgtgaggaggaggtggagaaagagagggaaggggagattgagaaagagatagct
gaaggggaaaggaggagggaggagggattgatggagaaaggtagggacccacttagtagg
tgcatgttggactcattgggccttcgattggactctagtgcaggtgataataaaggacta
cttctgtatgagactagtacaactaatatttcactaaacgctgtgggcctgaaccctgtc
tgccttaacacttgtccaaatggaggtgtgtctatacctagagttacagaccctaacatc
ctgaagggttcatctcaaagtgaccctcgtattcgtccgttgtccccaggtggccctcgg
ccaatgactacgcccaaggttgagtcacatgaccccagagaacccgccctcacctgccca
gtgtgtcaggtgacacaggacaccgataacctcaccctctttaaccgacacgttgacctc
tgtctaaaccaggaggtcttacatgagcttgaaggactggcatctgtggactgcaccacc
cacaatgcaacacctgctgcccacaaagagcgagagcagcccctgcggagagcgccacag
aaaggcaagagcaaaaggagaggctcatctcccccacccccatctaagaaggtcaaagcc
ctgggcccagctcggaacaccatcgacaagttctttaggtga
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