KEGG   Oncorhynchus mykiss (rainbow trout): 110537685
Entry
110537685         CDS       T07259                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-Q alpha chain
  KO
K06752  MHC class II antigen
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04145  Phagosome
omy04514  Cell adhesion molecule (CAM) interaction
omy04672  Intestinal immune network for IgA production
omy05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    110537685
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110537685
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    110537685
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    110537685
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omy04147]
    110537685
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110537685
  Exosomal proteins of epithelial cells
   110537685
  Exosomal proteins of breast milk
   110537685
SSDB
Motif
Pfam: C1-set Ig_3 MHC_II_alpha ig Ig_2 C2-set_2 C2-set_3 I-set
Other DBs
NCBI-GeneID: 110537685
NCBI-ProteinID: XP_036793547
Ensembl: ENSOMYG00000013581
LinkDB
Position
12:45834957..45841185
AA seq 253 aa
MSFEMNYSVIILILTGAVCTSAEIHHEIHFIYGCFESSDPAVGLEIDGDEVFYGDFSKNS
NTCLIADVVFTLPKFISITPEDKERACEYATISRVWCKDCIAWGKQSVPKIPKIKDAPES
TIYPRDEVELGVENTLICFVNDFFPPPVKVNWTKNGMEVTEGLSLSHYYPNKDGTFHQFS
SLSFTPQKEDVYICTVAHTALKYPKTREYKVSGSSVGPGPAIFCGVGLTLGLLGVATGIF
FIYKGKRATESQE
NT seq 762 nt   +upstreamnt  +downstreamnt
atgagcttcgagatgaactactctgtgattatactgattctcactggagccgtttgcact
tctgcagaaattcatcatgaaattcactttatctacggatgctttgagtcaagtgatcct
gcggtgggacttgagattgatggagatgaagtcttctatggcgacttcagtaaaaacagt
aatacgtgtctaatagcagatgtagtgtttacattacctaaattcatatctattacacca
gaggataaagaaagggcttgtgaatatgctaccattagcagagtttggtgcaaagactgc
atcgcatggggcaaacagtctgtaccgaaaataccaaaaatcaaagatgcccctgagagc
accatctaccccagggatgaggtggaactgggggtggagaataccctcatctgctttgtg
aatgatttctttcccccacctgtcaaagtcaactggaccaagaatggaatggaggtgact
gagggattgtctctcagtcattactatcctaataaagatggaacgttccaccagttctcc
agcctgagtttcaccccacaaaaggaagacgtctacatctgcactgtggcgcacacggcc
ttgaagtaccccaaaaccagggaatataaggtcagtgggtccagtgttggtcctggtcct
gctatattctgtggagtgggcctcactcttgggctgctgggggtggctactggaatattc
ttcatctacaaaggaaagagagccactgagtctcaggaataa

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