Oncorhynchus mykiss (rainbow trout): 118936797
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Entry
118936797 CDS
T07259
Name
(RefSeq) C-type lectin domain family 4 member M-like
KO
K06563
C-type lectin domain family 4 member L/M
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03260
Virion - Human immunodeficiency virus
omy03264
Virion - Flavivirus
omy04145
Phagosome
omy04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03260 Virion - Human immunodeficiency virus
118936797
03264 Virion - Flavivirus
118936797
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118936797
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
118936797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
118936797
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
omy04054
]
118936797
04090 CD molecules [BR:
omy04090
]
118936797
04091 Lectins [BR:
omy04091
]
118936797
Membrane trafficking [BR:
omy04131
]
Endocytosis
Phagocytosis
C-lectin receptors
118936797
Pattern recognition receptors [BR:
omy04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
118936797
CD molecules [BR:
omy04090
]
Proteins
118936797
Lectins [BR:
omy04091
]
C-Type lectins
Group 2: Type II membrane receptors (Asialoglycprotien and DC receptors)
DC-SIGN subgroup
118936797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
FBF1
HALZ
FapA
DUF3450
Cep57_CLD_2
Exonuc_VII_L
KASH_CCD
Spc7
ZapB
ERM_helical
Cas_Cas5d
APG6_N
HAUS-augmin3
Crescentin
bZIP_1
Taxilin
DUF3810
GAS
MscS_porin
Golgin_A5
TPR_MLP1_2
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
118936797
NCBI-ProteinID:
XP_036790035
LinkDB
All DBs
Position
10:79882915..79895771
Genome browser
AA seq
328 aa
AA seq
DB search
MSEEIYENCDGFSGKKIYKINKIETMDINDQIYNNERPIVPRKKDGVGDQHSVSCQWWKR
YSGAAAGCLGLLCVLLLAGIIGLFLYQRNQLTSSNTLTEERDQLQTCGNNLTEERDQLQT
SNNTPNEERDQLQTSDNTLTKERNQLQTRYNTLTKERDKLQTRYNTLTKERDQLQTRYNI
LTKERDQLQKETERLKQSLVEKVCPRGWKKLGSRCYYVSTEKKSWEESRQDCRYRGADLV
VIKNQEQQTFVNWLCGVKNYVWIGLTDSVSEGTWKWVDYTTLTTKYWNSKEPNGGRAENC
VYFYSWSSDTGAWWDYDCSYQYRWICEK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggaaatctatgaaaactgcgatggatttagtggcaaaaaaatatataaaata
aataaaatagagaccatggacattaatgatcaaatatacaacaacgaaagacccatcgtg
ccccgcaagaaggatggagttggtgatcaacattcagtgtcttgtcagtggtggaagaga
tactctggagctgctgcaggatgtctggggctgctgtgtgttctcctactggctgggatc
ataggcctgtttctctaccagagaaaccaattgaccagttccaacaccctgactgaagag
agagaccagttacagacctgcggaaacaaccttactgaagagagagaccagctacagact
agcaacaacaccccgaacgaagagagagaccagctacagactagcgacaacacgctgacc
aaagagagaaaccagttacagaccagatacaacaccctgaccaaagagagagacaagcta
cagaccagatacaacaccctgaccaaagagagagaccagctacagactagatacaacatc
ctgaccaaagagagagaccagctacagaaagagacagaacgtctgaaacaatctttagtt
gagaaagtttgtccgcgaggatggaagaagcttggtagcaggtgttactacgtctctact
gagaaaaaatcctgggaggagagcagacaggactgcagatatagaggagcagacctggtt
gtcatcaagaaccaagaacaacagacatttgtcaattggttatgcggggtaaagaactat
gtctggattggtctgactgactctgtttctgaggggacctggaaatgggtggactacaca
acactgaccacaaagtattggaacagtaaagagcctaatggtggaagagcagagaactgt
gtgtatttctactcctggtcatcagacacaggagcttggtgggactatgactgttcctat
caatacagatggatctgtgagaaatag
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