KEGG   Oncorhynchus mykiss (rainbow trout): 118938428
Entry
118938428         CDS       T07259                                 
Name
(RefSeq) platelet-derived growth factor subunit A-like isoform X1
  KO
K04359  platelet-derived growth factor subunit A
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010  MAPK signaling pathway
omy04020  Calcium signaling pathway
omy04510  Focal adhesion
omy04518  Integrin signaling
omy04540  Gap junction
omy04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    118938428
   04020 Calcium signaling pathway
    118938428
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    118938428
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118938428
   04540 Gap junction
    118938428
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    118938428
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:omy04052]
    118938428
   00536 Glycosaminoglycan binding proteins [BR:omy00536]
    118938428
Cytokines and neuropeptides [BR:omy04052]
 Cytokines
  Growth factors (RTK binding)
   118938428
Glycosaminoglycan binding proteins [BR:omy00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   118938428
SSDB
Motif
Pfam: PDGF_N PDGF HHH_XRCC3_RpoA Phage_T4_Y04M
Other DBs
NCBI-GeneID: 118938428
NCBI-ProteinID: XP_036798249
UniProt: A0A8K9WT50
LinkDB
Position
13:11171376..11180988
AA seq 243 aa
MRAAFLSFLLACLLCLLRTAAEEDPLPPELLERLSRSEIRSISDLQRLLELDLEENEVIG
ENKQRYHNKAFPHSYSQLKSSQTHSRHKRSIEEALPAVCKTRTVIYEIPRSQVDPTSANF
IIWPPCVEVKRCTGCCNTSNMHCLPSRKHHRTVKVAKVEYVRRRPKLKEVLVRLEEHLEC
ICTSKRHIKELYDTDNDPPLPPPPPSFTGPSRTMGKGRKRKKLKNLKEFLIPFSGMWKNM
SVY
NT seq 732 nt   +upstreamnt  +downstreamnt
atgagagccgcttttctgagcttcctcctcgcctgcttattgtgcctgttacgcaccgcc
gctgaggaggacccactccccccggagctgttggagcggctgtcccgcagtgagatccgc
agcatcagcgacctccagcggctcctggagctagacttggaagagaatgaggtgataggg
gagaacaaacagaggtaccacaacaaggccttcccccacagctactcacagctgaagagc
tctcagacacactccaggcacaagaggagcatcgaggaggcgttacccgcggtgtgtaag
actcgtacggtgatctacgagatccctcggagccaggtggatcccacctccgctaacttc
atcatctggcccccctgtgtagaggtgaagagatgtaccggatgctgcaacaccagcaac
atgcactgcctgccctcccgcaagcaccaccgcactgtcaaggtggctaaggtggagtat
gtgaggaggcgtcctaaactgaaggaggtgctggtgcggctggaggagcaccttgagtgt
atatgcacctccaaacgacacatcaaggaactctacgacacagacaatgacccccctctt
ccccctcctcccccttcattcacaggacccagtaggaccatgggtaaagggaggaaacgt
aaaaagctcaaaaacctcaaagaatttctcatacctttctcgggcatgtggaaaaacatg
agtgtttattag

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