KEGG   Oncorhynchus mykiss (rainbow trout): 118940033
Entry
118940033         CDS       T07259                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-Q alpha chain-like
  KO
K06752  MHC class II antigen
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04145  Phagosome
omy04514  Cell adhesion molecules
omy04672  Intestinal immune network for IgA production
omy05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    118940033
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118940033
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    118940033
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    118940033
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omy04147]
    118940033
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118940033
  Exosomal proteins of epithelial cells
   118940033
  Exosomal proteins of breast milk
   118940033
SSDB
Motif
Pfam: C1-set Ig_3 ig MHC_II_alpha Ig_2 C2-set_2 I-set APG12
Other DBs
NCBI-GeneID: 118940033
NCBI-ProteinID: XP_036804058
LinkDB
Position
17:14678126..14680423
AA seq 234 aa
MMMALVFMIVLFTVSSTQGQAHVFTVIGARSETEEFNMTIVADGNEYLHVYLKNKEDVVT
LPEWVNDVDCPICVRTAESQRADLSNYIKVFSLETPEAKVPPEIKLYAKEEVKLGINNSL
VCFINNFFPPPVQVKWTKNDENVPKGVKVGQYATNSDYTFYRFSTLTFEPQEGDIYTCIV
DHMALDEPLTRTWEFEVPPHPSVGPAVFCGLGLTLGLLGVATGIFFLVKGTQRQ
NT seq 705 nt   +upstreamnt  +downstreamnt
atgatgatggctcttgtgtttatgattgtgcttttcacggtgagttctacacaaggacaa
gcgcatgtattcactgtcataggcgcacgttctgaaacggaggaatttaacatgaccatt
gtagcagacggtaatgaatatctccatgtatatttaaaaaacaaagaagacgtggtaacg
ttaccagaatgggtaaatgatgtagattgtcctatttgcgtcagaactgcagagagccaa
agagcagatcttagcaattacattaaagtcttcagccttgaaaccccagaagctaaagtt
cctcctgagatcaaattgtatgccaaggaagaagtgaaactgggaataaacaactctctc
gtctgcttcatcaataatttctttcctccgcctgtccaagtcaaatggaccaagaatgat
gagaacgtccccaagggggttaaagtgggtcaatatgcaaccaacagtgattacactttc
taccgtttctccactctgacctttgaaccacaagagggagacatctacacctgtattgtg
gatcacatggccctagatgaacctttaaccaggacatgggagttcgaggtgcccccccat
cccagtgttggtcctgctgttttctgtggactgggtctgacgctggggctgctgggagtc
gctaccggaatattcttcctcgtcaaaggaacccaacgtcaatga

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