Oncorhynchus mykiss (rainbow trout): 118940033
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Entry
118940033 CDS
T07259
Name
(RefSeq) H-2 class II histocompatibility antigen, A-Q alpha chain-like
KO
K06752
MHC class II antigen
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04145
Phagosome
omy04514
Cell adhesion molecules
omy04672
Intestinal immune network for IgA production
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118940033
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118940033
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
118940033
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118940033
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
118940033
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118940033
Exosomal proteins of epithelial cells
118940033
Exosomal proteins of breast milk
118940033
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Gene cluster
GFIT
Motif
Pfam:
C1-set
Ig_3
ig
MHC_II_alpha
Ig_2
C2-set_2
I-set
APG12
Motif
Other DBs
NCBI-GeneID:
118940033
NCBI-ProteinID:
XP_036804058
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All DBs
Position
17:14678126..14680423
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AA seq
234 aa
AA seq
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MMMALVFMIVLFTVSSTQGQAHVFTVIGARSETEEFNMTIVADGNEYLHVYLKNKEDVVT
LPEWVNDVDCPICVRTAESQRADLSNYIKVFSLETPEAKVPPEIKLYAKEEVKLGINNSL
VCFINNFFPPPVQVKWTKNDENVPKGVKVGQYATNSDYTFYRFSTLTFEPQEGDIYTCIV
DHMALDEPLTRTWEFEVPPHPSVGPAVFCGLGLTLGLLGVATGIFFLVKGTQRQ
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggctcttgtgtttatgattgtgcttttcacggtgagttctacacaaggacaa
gcgcatgtattcactgtcataggcgcacgttctgaaacggaggaatttaacatgaccatt
gtagcagacggtaatgaatatctccatgtatatttaaaaaacaaagaagacgtggtaacg
ttaccagaatgggtaaatgatgtagattgtcctatttgcgtcagaactgcagagagccaa
agagcagatcttagcaattacattaaagtcttcagccttgaaaccccagaagctaaagtt
cctcctgagatcaaattgtatgccaaggaagaagtgaaactgggaataaacaactctctc
gtctgcttcatcaataatttctttcctccgcctgtccaagtcaaatggaccaagaatgat
gagaacgtccccaagggggttaaagtgggtcaatatgcaaccaacagtgattacactttc
taccgtttctccactctgacctttgaaccacaagagggagacatctacacctgtattgtg
gatcacatggccctagatgaacctttaaccaggacatgggagttcgaggtgcccccccat
cccagtgttggtcctgctgttttctgtggactgggtctgacgctggggctgctgggagtc
gctaccggaatattcttcctcgtcaaaggaacccaacgtcaatga
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