Oncorhynchus nerka (sockeye salmon): 115101218
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Entry
115101218 CDS
T07952
Name
(RefSeq) polyhomeotic-like protein 1
KO
K11456
polyhomeotic-like protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115101218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115101218
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
115101218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
115101218
NCBI-ProteinID:
XP_029476394
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Position
LG3:1316642..1326299
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AA seq
809 aa
AA seq
DB search
MDAGDDQNTGSTNGNAPSAGNSRPPQIAHMSLYERQAVQALQALQRQPNAAQYFQQLMLQ
QQINSAQQLHNLAAVQQATLAASRQSNSPNHSVSQATTTVNLSTTSGGGTMTNPRPLGPA
TSVTSSALSQSVLLGGNSAGQGQMYLRVNRSLRAPLTASQLIFMPGGTATAAVATVAQQQ
PQQQQQQQEVHPTSNAQSDNDQVQNLALHCISTPRVAAVKTEFPDRRDAANYSLSQQQQH
PQQQQQQFSQNTQQQQQQMANKLTSYTHPTALTSINVKTGNQLNMAPTAATSVPASSSPS
PTLPLSQLLLSPSGLCQARAVTTVTPAATVTHILVPTSNVPTSSQGYPIGSVAPKTNVNT
QTLVVQPLQQSNTNLDKVSHSSGPVHIQPKTSQGHRLPVQLSPRHPPPILPAPPNTGGHH
PPHVPVQLVGARQGSVGNSQALAQARSCCPQDNGIAIASTGGNTTAKPAIGSLKRKSETD
ATNEMAVEPSQLCCPPMRDSAPLSPAPTMDSAPKVVPAFSSPPTLSLPLSWGVGGQGDRA
PLPQAVVKPQVLTHLIEGFVIQEGAEPFPVTGPVKEPLAMGVQQADNGGPAVLKCEYCES
LAPASQFRGSKRFCSKTCAKRYNVSCSHHFQVSRGRASARPPGPPVPPDNIVRRRGPRRS
SSEIACAKIAGRHLPVKECRSESSRSEDVSSCDEEEEEEEDSPSLSPSSSLSCPRPTHCD
PHLDDSAQGSLPLDEANFLSGSPTHWGVEEVCSFISSLQGCEELAAQFLSQEIDGQALLL
LREEHLISTMNIKLGPALKICAFINSLRD
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggtgatgaccagaacacgggctctaccaatgggaatgcgccgtctgctggg
aactcccgccctccccagatagcccacatgtctctgtatgagaggcaagctgtgcaggcc
cttcaggcgctgcagagacagccgaacgcagcccagtacttccagcagctgatgctgcag
cagcaaatcaacagtgcccagcagcttcacaacctggctgccgtgcaacaggccaccctc
gctgctagtcgccagtccaactctcccaaccacagtgtctcccaagcaaccaccactgtc
aatctgagcaccacctctgggggagggaccatgaccaatccccgccccctcggccctgcc
acatcagtgacatcatcagctctcagccaatcagtgctgctgggtgggaactcagccgga
cagggccagatgtacctgagagtcaaccgctccctcagggcacccctcacagcctcccag
ctcatcttcatgcctggtggcacagcaacggctgctgtggcgacagttgcacagcaacag
cctcagcaacaacagcagcaacaggaagtacatcccacctccaatgcccaatccgacaat
gaccaggtgcaaaacctggctctccactgtatctccactcccagagtggccgcagtgaag
acggagtttccagacaggagagacgcagccaactattctctaagtcaacaacaacagcat
cctcagcagcaacagcagcagttctctcagaacacccagcagcaacagcaacaaatggcc
aacaaactgactagctacactcatcccactgctctcaccagtataaatgtcaagactgga
aaccagctgaatatggccccaaccgctgccacctcagttcctgcctcctcctccccctct
cccacgctccctctctcccagctcctcctctccccctcaggcctatgtcaggcccgggcg
gtaaccacggttacccctgctgccacggtgacgcacatcctagtccccacctccaacgtt
cctacctcctctcagggctaccccataggttcagtcgcccccaaaactaacgtcaacacc
cagaccttggtggtgcagccactgcagcagtccaacactaacttggacaaggtgagccac
agctctggccctgtgcacatacagcccaaaacctcacagggtcaccgcttacctgtccag
ctttccccacgccaccctccacctatcctcccggctccgcccaacacggggggccaccac
ccgccccatgtcccagtccagctggtgggagctaggcagggctcagtaggaaactcccag
gctttggcacaggcccgaagctgctgcccccaggacaacggcatcgctatagcctctact
ggagggaacaccacggcaaagcctgcaattggctcattgaagaggaagtcggaaactgat
gcaaccaatgagatggcagtcgaaccttcccaactttgctgtccaccaatgagagattct
gcccctctatctcccgcccccacgatggactcagctcctaaagtggtgccagccttctcc
tctccccccaccctgtctctacccctgtcttggggggtggggggtcagggagacagagcc
cctctgcctcaggcggtggtcaaacctcaggtcctcacccacctcatagagggttttgtt
atccaggagggagctgagcctttccctgtgactgggccagtgaaggagccactagccatg
ggtgttcaacaggctgacaatggaggccctgcagtgttgaagtgcgagtactgtgagagc
ttggctccagccagccagttcaggggctccaagaggttctgctccaagacctgcgctaag
agatacaatgtgagctgcagtcatcacttccaggtcagtagggggcgagcttctgcacgg
ccgcctggtcctcccgttcccccagacaacatcgtcagacgcaggggtcctcgcaggagt
agctcggagatcgcctgcgctaaaatagccggcagacatttgcctgtcaaggagtgtcgt
tctgaatccagtcgctcagaggatgtgtccagttgtgacgaggaggaggaggaggaagaa
gattccccatcactctcccctagctcctccctctcctgccctaggcccacccactgcgat
ccccatttggacgactcagctcaaggcagcctcccattggatgaggccaacttcctgtct
gggagccccacccattggggtgtggaggaggtctgcagtttcatctcttcactacaaggt
tgtgaggagctggcagcccagttcctgtcccaggagattgacggacaagccctgctgcta
ctcagagaagaacacctcatctccaccatgaacatcaaactaggacccgccctcaagatc
tgtgccttcatcaacagcctacgagactga
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