Oncorhynchus nerka (sockeye salmon): 115101251
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Entry
115101251 CDS
T07952
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like isoform X1
KO
K04943
potassium intermediate/small conductance calcium-activated channel subfamily N member 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115101251
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
115101251
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
Ion_trans
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
115101251
NCBI-ProteinID:
XP_029476457
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Position
LG19:23521496..23557902
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AA seq
682 aa
AA seq
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METPLQLKNDFFQEQQFQHHCKCQHYCGPEERSTKQRNQCCTCKNCTCGARKSLVFRGTS
ATTQGTLRTPSVTSSRQGCQFSVCEFKPSSHGSSPRHHHHQHCHNRPRGSPSSSHKESNS
YNEIAMSSCRYNGGVMRPLSNLSSSRRNLHEFDSESQPLQPISTADASDTLASKPENNST
TLMPYASGDGGGGCNNSGSKSGKKKNQNIGQKLGHRRALFEKRKRLSDYALIFGMFGIVV
MVIETELSWGAYGKESLYSLALKCLISLSTIILLGLVIIYHAREIQLFMVDNAADDWRIA
MTYERIFFICLEILVCAIHPIPGNYTFTWTARLAFSYTPSKTDADVDIILSIPMFLRLYL
IARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFTISLWIIAAWT
VRACERYHDNMDITSNFLGAMWLISITFLTIGYGDMVPNTYCGKGVCLLTGIMGAGCTAL
VVAVVAKKLELTKAEKHVHNFMMDTQLTKRVKNTAANVLRETWLIYKNTKLVRKMDHARV
RKHQRKFLQAIHQARKYIYWVLNGLLFRLRSVKMEQRKLNDQANSLVDLAKTQNIMYDLI
SDLNERGEDMEKRIALLETKLETLLGNLQALPGLISQVISQQHRDFLEVQLQPYNKHSPE
RSQSVSRRRSSSTAPPTSSESS
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccccattgcagttgaagaacgatttctttcaagagcagcagttccagcatcac
tgtaagtgccagcactactgcggaccagaggaacgctccactaagcagcgcaaccaatgc
tgcacctgcaagaactgtacctgtggtgcaagaaaaagcctagtttttcgcgggacgtcg
gcaaccactcaaggaactttaaggacgccatccgtaacgtcttcgagacaaggttgtcaa
tttagcgtctgtgagtttaagccctccagtcatggtagttcacccagacatcaccaccat
cagcactgccacaatcggccgcggggcagcccgagcagcagccacaaagagagtaactcg
tataacgaaatagccatgagcagctgcagatacaacggcggcgtaatgcggccgctgagc
aacttgagctcgtcccgcagaaacctacacgagtttgattcagagtcccagcctttacaa
ccaatttccaccgcagatgcatcggacaccctagcatctaaaccggagaacaattcgacc
accctgatgccctacgcatcgggagacggagggggtggatgtaacaacagtggcagtaaa
tcgggtaaaaagaagaaccagaacattgggcaaaagcttggacatagaagggccttgttt
gagaaaaggaagcgcctcagcgactatgctttgatctttgggatgtttgggatcgttgtt
atggttatagagactgaactctcatggggagcatatggaaaggaatccttgtattcatta
gctctaaaatgcctgataagcctttctacaatcattcttcttggtctggttatcatatac
cacgcaagggagattcagttattcatggtggacaatgcagcagatgactggaggatagcc
atgacctacgagcgcatcttcttcatctgcctggagatcctggtgtgcgccatccacccc
atcccagggaactacaccttcacctggacagcgcgcctggccttctcctacaccccgtcc
aagacggacgcagacgtggacatcatcctgtccatccccatgttcttgcggctgtatctc
atcgcccgcgtcatgctgctccacagcaagctcttcacagacgcctcgtcccgcagcatc
ggggcgctcaacaagatcaacttcaacacacgcttcgtcatgaagaccctgatgaccatc
tgccctggcaccgtgttgctggtctttaccatctcgttgtggatcatcgctgcctggacc
gtgagggcctgcgagagataccatgacaacatggacataaccagcaactttctaggagcc
atgtggttgatatcaatcacttttctgaccattggatatggggatatggtacccaacact
tactgtggaaaaggagtctgtctcctcactggtattatgggagccggctgcacagccttg
gtagtggctgtggttgcaaagaaactggagttaaccaaagctgaaaaacatgttcataat
tttatgatggacacccagctgacaaaaagagtgaaaaacacagctgcaaatgtactgagg
gagacctggctcatctacaagaacaccaaacttgtgaggaagatggaccatgccagagtc
aggaagcaccagaggaaattcctccaagccattcatcaagctcgaaaatacatttattgg
gttctgaatggtcttctgttcagattgagaagtgttaaaatggagcaacgcaagctgaat
gaccaagcaaactcactagtggaccttgcaaagactcagaacatcatgtatgacctgatc
tcagacctgaacgagagaggggaggacatggagaagaggatcgccctgctggagaccaag
ctggagactttgctggggaacctgcaagccctgccaggactcatcagccaggtcatcagc
cagcagcacagggacttcttggaggtgcagctccagccgtacaacaaacacagccctgag
cgatcgcagtccgtgtccagacggaggtcgtcctccactgcaccacccacctcctccgag
agcagctag
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