Oncorhynchus nerka (sockeye salmon): 115101626
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Entry
115101626 CDS
T07952
Name
(RefSeq) putative UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase LOC100288842
KO
K00715
ganglioside galactosyltransferase [EC:
2.4.1.62
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
one00604
Glycosphingolipid biosynthesis - ganglio series
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
115101626
00604 Glycosphingolipid biosynthesis - ganglio series
115101626
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115101626
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.62 ganglioside galactosyltransferase
115101626
Glycosyltransferases [BR:
one01003
]
Glycan extension
Glycolipid
115101626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
Motif
Other DBs
NCBI-GeneID:
115101626
NCBI-ProteinID:
XP_029476943
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All DBs
Position
LG20:complement(6532129..6536849)
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AA seq
372 aa
AA seq
DB search
MVGRGLSVCKPRFGKRGRFGVVPALCVLIVSAALLALLFVDSIESWATSMNMNTMVEAQG
GIIPPQSVPPTRPEEYLLMPSPLVCQRAKPYLIAMVTSAPANQMARQAIRDTWGGEVEVR
GHRVMTLFMVGVASDPGLAKLLIEEARERGDLIQGRFWDSYSNLTLKTLSMLNWARRFCP
QAHFLAKVDDDVLFNPGALLRYLNRSTVTNTYEHGDLYLGRVHLHVAPDRDPDSKHYLPR
GAYPASVFPDYCSGTAYILSRSSLLKISLMAASSPLPTPLPPEDVFVGLCAHAAGVLPSH
CPLFSGGPAVPYGRCCYQAMVSIHHISPREMLRFWADIHSPPPCSWLGLRASLGVCKVRA
MLGTFLGVDQGL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggtggggcggggcctgtcggtgtgtaagccccgctttggtaagcgggggcggttcggg
gtggtgcctgctctctgtgtgctgatagtcagtgctgccctgctagctctgctcttcgtg
gactccattgagtcatgggccacctccatgaacatgaacacaatggtagaggcgcagggg
gggatcatacccccacaaagtgtccccccaaccagacccgaggagtacctccttatgccc
agccctctcgtctgccagcgtgccaaaccctacctcatcgccatggtgacctccgcccca
gccaatcagatggcccgccaggccatccgggacacgtggggtggggaggtggaggtcagg
ggtcatagggtcatgaccttgttcatggtcggggtggcctctgaccccgggctagccaag
ctgctgatagaggaggcccgggaacgaggggacctgatccaagggcgcttctgggactcc
tactctaacctgaccctgaagaccctctccatgctgaactgggcccgacgcttctgcccc
caggcccacttcctggccaaggtggacgatgacgtcctgttcaaccccggggccctgctg
cgctacctgaacaggagcaccgtgaccaacacctacgagcatggggacctgtaccttggc
cgggtccaccttcacgtggctccagaccgagacccagacagtaagcactacctccctaga
ggggcgtaccctgcatctgtcttccctgactactgcagtggcactgcctacatcctctct
cgctcctccctgctcaagatctccttgatggccgcttcctcacctctgcccacccctctg
ccacccgaggacgtttttgtgggtctgtgtgcccatgcggctggagtgctgccctcccac
tgcccgctgttctctggtgggcccgcagtgccctatgggcgctgctgctaccaggccatg
gtgtccatccaccacatctcccccagagagatgctccggttttgggctgacatccactcc
cctcccccctgctcctggctgggcctacgcgcctctctgggggtctgtaaagtccgggcc
atgctggggacctttctgggggtggatcaggggctgtga
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