Oncorhynchus nerka (sockeye salmon): 115102077
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Entry
115102077 CDS
T07952
Symbol
ift122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
KO
K19656
intraflagellar transport protein 122
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115102077 (ift122)
Cilium and associated proteins [BR:
one03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
115102077 (ift122)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_IFT122_2nd
Zn_ribbon_IFT122_C
Zn_ribbon_IFT122
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
TPR_GEMI5
WD40_Prp19
TPR_IF140-IFT172
TPR_IFT80_172
EIF3I
ANAPC4_WD40
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
WDR55
TPR_7
Beta-prop_WDR35_TULP_N
TPR_COPA_B
TPR_2
Beta-prop_EML
WDR90_beta-prop_4th
TTC7_N
TPR_12
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
115102077
NCBI-ProteinID:
XP_029477499
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Position
LG20:complement(6836478..6871085)
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AA seq
1058 aa
AA seq
DB search
MLLLRHNDSIQCVAYNPVSHQLASCSSGDFGLWSPEQKSVSKHKVNSKITCCGWTNDGQY
LALGMMNGVVSIRNKNGEEKVKIERPGGSSSPIWSIAWNPSKDEHNDILAVADWGQKLSF
YQLSGKQIGKDRTLTYDPCCVSYFSKGEYIVMGGSDKQASLYTKDGVRLGTIGEQSSWVW
TCRVKPDSNYVVLGCQDGTIAFFQLIFSTVHGLYKDRYAYRDSMTDVIVQHLITEQKVRI
KCRELVKKIAIYRNRLAIQLPEKILIYELYSDDSSDMHYRIKEKICRKFECNLLVVCSQH
IILCQILKIFVDNPFAITLLKQSTSVRCLDMSTSRSKLAVVDEHNTCLVYDIHTKELLFQ
EPNANSVAWNTQCEDMLCFSGSGYLNIKASNFPVHQQKLQGFVVGYNGSKIFCLHVYSMS
AVEVPQSAPMYQYLERRMFKEAYQIACLGVTDSDWRDLATEALEGLDFDTSKKAFIRVRD
LRYLELINSIEERKKRGESDTELFLADVYAYQGKFHEAARLYKRTGLDSRALSMYTDLRM
FEYAKEFVGAADPKNTRMLMSKQADWAKNSKEPRAAAQMYLTAGEHLKAIDIIGEHGWVD
MLIDIARKLDKAEREPLAKCAGYFQKLKHHGYASETYSKMGDLQALVHLHVEARHWDEAF
ALVEKHAQFKDDVYVPYAQWLAENDRFEEAQKAFHKAGRQSEAVKVLEQLTHNAVVESRF
NDAAYYYWMLSMQCLDIARENEERKEEMLKKFKRFQHLAELYHVYHSIQRYTVRCSPQLK
DEPFSSHMPETLFNISRYLLHNLTKDVPLGISKVNTLYALAKQSRTLGAFKLARHAYEKL
QELHVPSRFQESMDLGSLTVRSKPYHDNEDLIPMCYRCSTNNPLLNSQGSVCINCKQPFI
YSASSYEVLPLVQFYLDKGIGDEEAVSLIDLEVPCIDRKAARWQEMSSGESQSLKLDDGT
EDTEEDPFMAKLSFEQGGSDFVPVVVSRSVLRSMSRRDVLIKRWPKPLQWEYYRSLLPDV
SITMCPSCFQMFHSEDYELLVLQHNCCPYCRRPIDEPN
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgttgctcctcagacataatgactccatccagtgtgttgcctacaacccagtcagccac
cagctggcctcctgctcctctggagactttggtctgtggtccccagaacagaaatctgta
tccaagcacaaagtcaacagcaagataacatgttgtgggtggaccaacgacggtcagtac
ctggccctgggcatgatgaacggggtggtgagcatcaggaataagaacggagaggagaag
gtgaaaatagagcgaccaggaggatcctcctctcctatctggtccatcgcatggaacccc
tccaaggatgagcacaatgacatcctggctgtggcagactgggggcagaagctgtccttc
taccagctcagtggaaaacagattgggaaggacagaactctgacctatgacccctgctgt
gtcagctacttctccaagggggagtacattgtgatgggtggctcggacaagcaggcctcc
ctctacaccaaagatggggtgcggctcggcaccatcggggagcagagctcctgggtgtgg
acctgtagagtcaaacctgactccaactatgtggtgttgggctgccaggatgggaccata
gccttcttccagctcatcttcagcacggtgcacggcctgtacaaggaccgctatgcctac
agagacagcatgaccgatgtcatcgtccagcacctcatcactgaacagaaagtgaggatc
aagtgcagagagcttgtgaagaagatagctatctacaggaaccgcctggccatccagctg
cctgagaagatcctcatctacgagctgtactctgacgactcctcggacatgcactaccgc
atcaaggagaagatctgcagaaagtttgagtgcaacctgctcgtggtctgctcccagcac
atcatcctgtgtcagatcctaaagatctttgttgacaacccatttgccatcactctgctg
aagcagtctacgtctgtgcgttgtctggacatgagtacatcccgcagcaagctggccgtg
gtggacgaacacaacacctgcctggtttacgacatccacaccaaggagctgctcttccag
gagcccaatgctaacagcgtagcctggaacacccagtgtgaggacatgctgtgtttctca
ggcagtggctacctcaacatcaaggccagtaacttcccagtgcatcagcagaagctgcag
ggcttcgtggtgggctacaacggctccaagatcttctgcctgcacgtgtactccatgtcc
gccgtggaggtgcctcagtcggctcccatgtaccagtatctggagaggaggatgttcaag
gaggcctatcagatcgcctgcctgggtgtgactgacagtgactggagggatctggccacg
gaagcactggagggcctcgactttgacacctctaagaaggcattcatcagagtacgagac
ctgcgctacctggagctcatcaacagcattgaggagaggaagaagagaggtgagagcgac
actgagctgttccttgcggatgtctatgcctaccaggggaaattccacgaggctgccagg
ctctacaagaggactggcttggactccagagctctcagcatgtacacggacctgcgcatg
tttgagtacgctaaggagtttgtgggcgcggcagaccctaaaaacactcgcatgctgatg
tccaagcaggccgactgggctaagaacagcaaggagccgcgggccgctgctcagatgtac
ctgactgcaggagaacacctcaaagccatcgacatcataggagaacacggctgggtcgac
atgctgattgacatagcccgtaagctggataaggcggagcgcgaaccactggctaagtgt
gcgggctatttccagaagctgaagcaccatggttatgcctctgagacctactccaagatg
ggagacctgcaggccctggtgcatctgcacgtggaggcacgacactgggatgaggccttc
gctctggtggagaaacatgcccagtttaaagatgacgtctatgtgccctacgctcagtgg
ctggctgagaacgaccgctttgaggaggcacagaaagctttccacaaggcgggccgacag
agcgaggctgtgaaggtgttggaacagcttacccacaatgccgtggtggagagcaggttc
aatgacgcagcatattattactggatgctttctatgcagtgtctggacatcgctagggaa
aacgaggagaggaaggaggagatgctgaagaagttcaagcgtttccagcacctggctgag
ctctaccatgtttaccactcaatacagcgttacacagtaagatgctcaccacagctgaag
gatgaaccctttagctcccatatgcctgagacgctctttaacatctccaggtacctccta
cacaacctcaccaaggacgtgccactgggcatctccaaagttaacactctttatgcgttg
gccaagcagagcagaaccctgggagcgtttaaactagccagacatgcctatgagaagctc
caggaactccacgttccctctcgcttccaggagtcaatggatctgggcagccttaccgtc
cgctccaaaccataccacgacaatgaggacctgatccccatgtgttatcgctgctccacc
aacaaccccctgctgaacagccagggcagtgtgtgtatcaactgcaaacagcccttcatc
tattcagcatcttcatacgaggtccttcctctggtgcagttctatctggacaagggtatc
ggtgatgaggaggctgtgtctctcattgacctggaagtcccttgcattgacaggaaggct
gctcgctggcaggagatgagcagtggggagtcccagtctctgaagctggatgatggcaca
gaagacacagaggaggaccccttcatggccaaactcagctttgagcaggggggctctgac
tttgtcccggtggtggtgagtcgctccgtgctgaggtctatgagcaggagggatgtcctg
attaagcgctggcccaaacccctgcagtgggagtactaccgttccttactgcctgatgtc
agcatcaccatgtgcccctcctgcttccagatgttccacagtgaagactatgagctgctt
gtgcttcagcacaactgctgtccctactgccgtcggcccatcgatgaacccaactga
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integrated database retrieval system
