Oncorhynchus nerka (sockeye salmon): 115102287
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Entry
115102287 CDS
T07952
Name
(RefSeq) vitamin D3 receptor A-like
KO
K08539
vitamin D3 receptor
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115102287
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115102287
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115102287
Protein phosphatases and associated proteins [BR:
one01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115102287
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115102287
Nuclear receptors [BR:
one03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
115102287
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
115102287
NCBI-ProteinID:
XP_029477937
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Position
LG20:complement(15928314..16008274)
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AA seq
423 aa
AA seq
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MEPMAVSISVVGPDEFNRNMPRICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFTC
PFNGSCSITKDNRRHCQACRLKCCVDMGMMKEFILTDEEVQRKKDLIQKRKEEEAAREAL
RPRLNDEQSQVIASLVEAHHKTYDNSYSDFTRFRPPVRDGPVTRSASRAASLHSLSDASS
DSFNHSPESVDTKLMKFSSLLMMYQESAGSPDSSEDDGSKLSMLPHLADLVSYSIQKVIG
FAKMIPGFRGLIAEDQIALLKSSAIEIIMLRSNQSFDMEDMSWSCGGSPDFKYCITDVTK
AGHTLDLLEPLVKFQVGLKKLQLHEEEHVLLMAICLLSPDRPGVQDHAKIEDIQDSLSEV
LQAYIRVNHPGGRLLYARMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGR
EVS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggagcccatggctgtgagcatctcagtggtcgggccggatgagttcaaccgcaacatg
ccgcgcatctgtggcgtctgcggcgacaaggccaccggcttccacttcaacgccatgacc
tgcgagggctgcaagggcttcttcagacgcagcatgaagcggaaggccagtttcacctgc
cccttcaacggcagctgctccatcaccaaggacaaccggcgccactgccaggcctgccgg
ctcaaatgctgcgtggacatgggtatgatgaaggagttcatcctgacagatgaggaggtg
cagaggaagaaggatctgatccagaagaggaaggaggaggaggcggcgcgggaggccctg
agaccaaggctgaatgacgagcagagccaggtcatcgcatcattggtggaggcacaccac
aagacctacgataactcctactccgacttcacacgcttcaggcccccggtgcgagacggg
ccagtaacacgcagtgccagtcgtgcagcctcccttcactcgctgtcagatgcctcctca
gactccttcaaccactcaccagagtcggtggacaccaagctgatgaaattcagcagtctg
ttgatgatgtaccaggaaagtgcaggcagcccggactccagtgaggacgatggctccaag
ctctccatgttaccccacctggctgacctggtcagttacagcatccagaaggtcattggc
ttcgctaagatgatccctggcttcagagggctgattgctgaggaccagatcgccctgctc
aagtcaagtgccatcgagatcattatgctacgctccaaccagtctttcgacatggaggat
atgtcctggagctgtggtggtagccctgacttcaagtactgcatcaccgacgtcaccaag
gcgggtcacactctggacctgttggagccgctagtgaagttccaggtgggcctgaagaaa
ctccagctccatgaggaggaacacgtgctgctcatggccatctgcctgctgtctccagat
cgtccaggggtgcaggaccacgctaagatagaggatatccaagacagtctgtcggaggtg
ctccaggcttacatcagggtgaaccacccgggaggacggctgctctacgccagaatgatc
cagaagctggccgacctgcgcagcctcaacgaggagcactccaaacagtaccgctcgctg
tccttccagcccgagcacagcatgcagctcaccccgctggtgctggaggtatttgggaga
gaggtgtcctag
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