Oncorhynchus nerka (sockeye salmon): 115102288
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Entry
115102288 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy-like isoform X1
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04120
Ubiquitin mediated proteolysis
one04144
Endocytosis
one04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115102288
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115102288
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115102288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115102288
04121 Ubiquitin system [BR:
one04121
]
115102288
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115102288
Membrane trafficking [BR:
one04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
115102288
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
HECT type E3
115102288
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
115102288
NCBI-ProteinID:
XP_029477941
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Position
LG20:16123220..16145991
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AA seq
882 aa
AA seq
DB search
MASSVAKPGPGNGYPMKAQLQIMVLSAKLKENRKNWFGPSPYVEVAVDGQSKKTEKCNNT
HSPKWKQPLTVIVTPFSKLIFRVWSHQTLKSDILLGMAALEVSETLKANDMKISEVVQTL
QLSADRDQTDVVGDLSVCLDGMQVDPEMFASAAEANTQSTSNGESQQNGDVKRNRDSSPS
VDGLEHRASPNGCAVAVNGTGSCKGSPALSAGGSRGNPLRPPRPSRPPPPTPRRPTSSPA
SSNGSIPTEESDGPSSDTPVSAPAVPDPNAPPPTHDQSQAIAASQADSVTPGPPRAPAVA
AGPLPPGWEQRVDQNGRLYFVDHVEKRTAWERPEPLPSGWERRVDPMGRVYFVDHITRTT
TWQRPTMETVRNYEQWQHQRNQLQGAMQQFNQRFIFGVNGLQDQVPATENKQFDPLGPLP
HGWEKRTDSNGRVYFVQHTTRTTQWEDPRTQGLLNEKPLPEGWEMRFTVDGIPYFVDHNR
RATTYIDPRTGKSSLENGPQITYVRDFKAKVQYFRFWCQQLSMPQHIKITVTRKTLFEDS
FQQIMSFNAQDLRRRLWIIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYC
LQINPASYINPDHLKYFKFIGRFIAMALFHGKFIDTGFSLPFYKRMLNKPWALKDLESID
PEFYNSLIWIKENDIEECGLEMYFSVDKEILGEITTHELKPDGGEVLVTEENKEEYIRLV
AEWRLSRGVEEQTQAFFEGFNEVLPQQYLQYFDAKELEVMLCGMQEIDLADWQRNTIYRH
YARSSKQVLWFWQLIKEMDNEKRMRLLQFVTGTCRLPVGGFADLLGSNGPQKFCIEKVGK
ENWLPRSHTCFNRLDLPPYKSYEQLKEKLMFAIEETEGFGQE
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagcgttgctaaaccaggccctgggaatggctaccccatgaaggcacaactg
caaattatggtgctgtcagcaaaactgaaagaaaacaggaagaattggtttggccccagt
ccatatgttgaagtggccgttgatggacagtccaaaaagacagagaaatgcaacaacacc
cacagtcccaaatggaagcagccgctcacagtaattgtcactccttttagcaagctaatc
ttccgagtatggagtcaccagaccttgaagtcggacatattgttaggcatggcagctctc
gaggtcagcgaaacactcaaagccaacgacatgaaaatctctgaggtggtgcagacgctg
cagctgagtgcagacagagaccagaccgatgtcgtgggggacctgtctgtctgtctggat
ggcatgcaagtggacccagagatgtttgcgtctgctgctgaggctaacacccaaagtaca
tcgaatggggaatcgcaacaaaacggggatgtgaagcggaatagagacagctctccttct
gtggatggtttggagcacagagcttccccaaatggttgtgcggtcgcagtgaatggcaca
gggtcttgcaaagggtctcccgctctgtcagcagggggctccaggggtaatcctctacgc
ccccccaggccctcccgaccccctccacccaccccgcgcagaccaacctcctctccagca
tcctctaatggatccattccaactgaagaaagcgatggccccagctcagataccccagtc
agtgcacctgcagtaccagaccccaacgccccaccccctacacatgaccagagccaagca
atagcagccagccaagcagacagtgtaaccccaggcccccccagagcccccgctgtcgcc
gcaggcccattgcctcctggatgggagcagagggtggatcagaacggaaggctgtatttc
gtagatcatgtggaaaagaggacggcgtgggagcgtcctgagcctctaccttctgggtgg
gagcggcgagtggaccccatgggcagggtctactttgtagaccacatcaccagaactacc
acatggcaacggcccactatggagacggtgcggaactatgaacagtggcagcaccaacgc
aaccagctacagggtgccatgcagcagttcaaccagcgcttcatatttggagtgaatggg
ctccaggatcaggttccagccactgagaataagcaatttgatcccctgggcccgctgcca
catggatgggagaaaagaactgacagcaacgggagagtgtactttgttcaacacaccaca
cggactacacagtgggaggaccctcgcactcaggggctgctgaatgagaagcctcttcca
gagggctgggagatgaggtttacagtcgacggcatcccatactttgtggaccacaacagg
agagccactacgtacatcgaccctcgtactggaaaatcttcacttgaaaatgggccccag
ataacttatgttcgagactttaaagccaaagtccagtacttcagattctggtgccagcaa
ttgtcaatgcctcagcacatcaagatcactgtcacccgcaaaaccctgtttgaggactcg
ttccaacaaataatgagcttcaatgcacaggacctccgcaggagactatggatcatattc
cctggggaagaaggtcttgattatggaggggtggcaagggagtggttcttcctgctgtct
cacgaggtgctgaatcccatgtattgcctgtttgagtatgctgggaaggacaactactgc
ctacagatcaaccctgcctcctacatcaaccctgatcaccttaagtacttcaaattcatc
ggacgcttcatcgccatggctcttttccacgggaagttcattgacacaggcttttcgcta
ccgttctacaagcgcatgctgaacaagccatgggcactgaaagatctagagtccattgac
ccagaattctacaattctctcatctggattaaggagaacgacattgaggagtgtggcctg
gagatgtacttctctgtggacaaagagattctgggtgaaatcaccactcatgagctcaag
ccggacggaggagaggtcctggtcactgaggagaacaaggaggagtatatcaggcttgta
gcagagtggaggttgtccagaggtgtggaggagcagacccaggccttctttgagggcttc
aacgaggtcctcccacagcagtacctgcagtactttgatgccaaagaacttgaggtcatg
ctgtgtgggatgcaggagatcgacctggcagactggcagaggaacaccatctacagacac
tatgcacgcagcagcaagcaggtcctctggttctggcagctcatcaaagagatggacaat
gagaagcggatgaggctcctccagttcgttacaggcacctgccggcttcctgtcggaggc
tttgcagacctattggggagcaatggcccgcagaagttctgcatcgagaaggtgggaaag
gagaactggctacccagaagtcacacctgcttcaatcgattggatctgcctccttacaaa
agctacgagcagctgaaggagaaattgatgtttgcgattgaagagactgagggctttggg
caggagtga
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