Oncorhynchus nerka (sockeye salmon): 115102801
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Entry
115102801 CDS
T07952
Name
(RefSeq) nectin-4-like isoform X1
KO
K06593
poliovirus receptor-related 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
one04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
115102801
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115102801
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115102801
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
Nectin family
115102801
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
Ig_2
ig
C2-set_2
Protocadherin
Stevor
RIFIN
TMEM154
He_PIG
Neur_chan_memb
Adeno_E3_CR2
DUF6097
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
115102801
NCBI-ProteinID:
XP_029478965
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Position
LG20:37134615..37154636
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AA seq
615 aa
AA seq
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MKLPVWDQGQWEAAWLVLWGFAVCVRGGFVEPPPSFALRSLTEGETRLPCQYQVQEDEQI
VQVSWIKELPDGTKEHIITAHRTEGHTEFGRYSGRVRFESRRSMVNSALLILTTEESDEG
KYTCHISTFPYGNFERKLSLTVWTFPISSLDPVVLEEGQSFHVAASCRSVARPAPRLTWD
TDLPGQAQNRSSEGGVMSTHFSLHPLRSMNGMRLDCLVWHPALEQPRRISNRLVVQFPPD
ASVTGFDGNWYMGLKGAELRCESGGNPKPKNFTWTRDGKALPDGLTVDGARLLFGRALRQ
NDTGVYECVVNNGVGTRKVECNITVTETSRSVQEVIFDTLVMIIIGVAAGVLVIVMIIVI
ILVNRYHRRKNSKLEMALSKRMLEINTLSRQASSRRLNSVSTDPRGQNEDCTLLRLDSGM
KKSLMSLEDHPIYKGSQSTLGGKWGTVREGDLDYLGRPILHQSSWRECRESMRGAEMEGE
REERRRRVESYLKSSNMSLAYLFLSMPHNMWLSISQDSGLPSSLVPMKPQDHDGSVGPTD
IPSMLSNLGGQREVMTEGEDWSDRQDVLEVDEADFDTSSYQISEALSNHFHYSNGFLRPK
PHSNAILLQPRGQKI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaagttacctgtctgggaccagggccagtgggaggcagcctggttggtgttatgggga
tttgcagtgtgtgtgaggggtgggtttgtggagcctcctccatcctttgcattgcggtcc
ttgacggagggtgagacgcggctgccctgtcagtaccaggttcaggaggacgagcagata
gttcaggtcagctggatcaaggagctacctgatggcaccaaggaacatatcatcaccgcc
caccgcacagagggacacacagagtttgggcggtactctgggagagtgaggtttgagagc
cgtcgctccatggtgaactctgctctgctcatcctgaccacggaggagtctgatgagggg
aaatacacctgtcacatcagcacattcccctatgggaactttgagaggaagctgtcactc
actgtgtggaccttcccaatctcctctctggacccggtggttctggaggagggccagtcc
ttccacgtggctgcctcctgccgctccgtggcccgccctgcaccccgcctgacctgggac
acggaccttcctggccaggcccagaaccgcagctccgagggcggggtcatgtccactcac
ttctccctgcaccccctgaggagcatgaatggcatgcggttggactgcctggtctggcac
cctgctctggaacaaccccgcaggatcagcaaccgcctggtggtgcaatttcccccagat
gcatctgtcaccggctttgatggcaactggtacatgggactgaagggagctgaactccgt
tgtgagtctggaggaaaccccaaaccaaaaaacttcacctggaccagggatggtaaggct
ctgccagatggcctgactgtggatggagcaaggcttctgtttggccgagccctgagacag
aatgacactggagtttatgaatgtgtggtgaacaacggcgttgggacaaggaaagtagaa
tgtaacatcacagttacagagacatctcggagtgtgcaggaagtgatctttgacactcta
gtgatgatcattataggtgtggctgctggggtgttggtcatcgtcatgatcatcgtcatc
attttagtcaaccggtaccacagacgcaaaaacagcaaattagagatggcgcttagcaaa
aggatgttagaaatcaacactctctccagacaggcctcctccaggagactcaactctgtc
agcacagaccccagaggacagaatgaagactgtacactactcagactagacagtggaatg
aaaaaaagcctaatgtcccttgaggaccatcccatctacaaaggcagtcaatccaccctc
ggtgggaagtgggggacggttcgagagggtgatttggactacctaggccgccccatcctg
caccaatctagctggcgcgagtgcagagagagtatgaggggggctgagatggagggagaa
agggaagagcgcagacgaagggtggaatcgtacctaaagagcagcaatatgtccctggcc
tatctgtttctctcaatgccacacaatatgtggctctctatttctcaggactctggcctt
ccttcctcccttgtccccatgaagccccaggatcatgatggcagtgtggggcccacagac
atcccctcaatgctcagcaacctgggtggccagagggaagtcatgacggaaggggaagac
tggagcgacagacaggatgtgctggaggttgacgaggctgactttgacaccagttcatac
cagatctcagaggcactctccaaccacttccactacagcaacgggttcctgcggcccaaa
ccacactccaacgccatcctcctacaacccagaggacagaagatctag
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