KEGG   Oncorhynchus nerka (sockeye salmon): 115102801
Entry
115102801         CDS       T07952                                 
Name
(RefSeq) nectin-4-like isoform X1
  KO
K06593  poliovirus receptor-related 4
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03265  Virion - Ebolavirus, Lyssavirus and Morbillivirus
one04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
    115102801
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    115102801
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:one04515]
    115102801
Cell adhesion molecules [BR:one04515]
 Immunoglobulin superfamily
  Nectin family
   115102801
SSDB
Motif
Pfam: Ig_3 V-set I-set Ig_2 ig C2-set_2 Protocadherin Stevor RIFIN TMEM154 He_PIG Neur_chan_memb Adeno_E3_CR2 DUF6097 EphA2_TM
Other DBs
NCBI-GeneID: 115102801
NCBI-ProteinID: XP_029478965
LinkDB
Position
LG20:37134615..37154636
AA seq 615 aa
MKLPVWDQGQWEAAWLVLWGFAVCVRGGFVEPPPSFALRSLTEGETRLPCQYQVQEDEQI
VQVSWIKELPDGTKEHIITAHRTEGHTEFGRYSGRVRFESRRSMVNSALLILTTEESDEG
KYTCHISTFPYGNFERKLSLTVWTFPISSLDPVVLEEGQSFHVAASCRSVARPAPRLTWD
TDLPGQAQNRSSEGGVMSTHFSLHPLRSMNGMRLDCLVWHPALEQPRRISNRLVVQFPPD
ASVTGFDGNWYMGLKGAELRCESGGNPKPKNFTWTRDGKALPDGLTVDGARLLFGRALRQ
NDTGVYECVVNNGVGTRKVECNITVTETSRSVQEVIFDTLVMIIIGVAAGVLVIVMIIVI
ILVNRYHRRKNSKLEMALSKRMLEINTLSRQASSRRLNSVSTDPRGQNEDCTLLRLDSGM
KKSLMSLEDHPIYKGSQSTLGGKWGTVREGDLDYLGRPILHQSSWRECRESMRGAEMEGE
REERRRRVESYLKSSNMSLAYLFLSMPHNMWLSISQDSGLPSSLVPMKPQDHDGSVGPTD
IPSMLSNLGGQREVMTEGEDWSDRQDVLEVDEADFDTSSYQISEALSNHFHYSNGFLRPK
PHSNAILLQPRGQKI
NT seq 1848 nt   +upstreamnt  +downstreamnt
atgaagttacctgtctgggaccagggccagtgggaggcagcctggttggtgttatgggga
tttgcagtgtgtgtgaggggtgggtttgtggagcctcctccatcctttgcattgcggtcc
ttgacggagggtgagacgcggctgccctgtcagtaccaggttcaggaggacgagcagata
gttcaggtcagctggatcaaggagctacctgatggcaccaaggaacatatcatcaccgcc
caccgcacagagggacacacagagtttgggcggtactctgggagagtgaggtttgagagc
cgtcgctccatggtgaactctgctctgctcatcctgaccacggaggagtctgatgagggg
aaatacacctgtcacatcagcacattcccctatgggaactttgagaggaagctgtcactc
actgtgtggaccttcccaatctcctctctggacccggtggttctggaggagggccagtcc
ttccacgtggctgcctcctgccgctccgtggcccgccctgcaccccgcctgacctgggac
acggaccttcctggccaggcccagaaccgcagctccgagggcggggtcatgtccactcac
ttctccctgcaccccctgaggagcatgaatggcatgcggttggactgcctggtctggcac
cctgctctggaacaaccccgcaggatcagcaaccgcctggtggtgcaatttcccccagat
gcatctgtcaccggctttgatggcaactggtacatgggactgaagggagctgaactccgt
tgtgagtctggaggaaaccccaaaccaaaaaacttcacctggaccagggatggtaaggct
ctgccagatggcctgactgtggatggagcaaggcttctgtttggccgagccctgagacag
aatgacactggagtttatgaatgtgtggtgaacaacggcgttgggacaaggaaagtagaa
tgtaacatcacagttacagagacatctcggagtgtgcaggaagtgatctttgacactcta
gtgatgatcattataggtgtggctgctggggtgttggtcatcgtcatgatcatcgtcatc
attttagtcaaccggtaccacagacgcaaaaacagcaaattagagatggcgcttagcaaa
aggatgttagaaatcaacactctctccagacaggcctcctccaggagactcaactctgtc
agcacagaccccagaggacagaatgaagactgtacactactcagactagacagtggaatg
aaaaaaagcctaatgtcccttgaggaccatcccatctacaaaggcagtcaatccaccctc
ggtgggaagtgggggacggttcgagagggtgatttggactacctaggccgccccatcctg
caccaatctagctggcgcgagtgcagagagagtatgaggggggctgagatggagggagaa
agggaagagcgcagacgaagggtggaatcgtacctaaagagcagcaatatgtccctggcc
tatctgtttctctcaatgccacacaatatgtggctctctatttctcaggactctggcctt
ccttcctcccttgtccccatgaagccccaggatcatgatggcagtgtggggcccacagac
atcccctcaatgctcagcaacctgggtggccagagggaagtcatgacggaaggggaagac
tggagcgacagacaggatgtgctggaggttgacgaggctgactttgacaccagttcatac
cagatctcagaggcactctccaaccacttccactacagcaacgggttcctgcggcccaaa
ccacactccaacgccatcctcctacaacccagaggacagaagatctag

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