Oncorhynchus nerka (sockeye salmon): 115102844
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Entry
115102844 CDS
T07952
Symbol
rapgef4
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04081
Hormone signaling
one04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
115102844 (rapgef4)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
115102844 (rapgef4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115102844 (rapgef4)
Membrane trafficking [BR:
one04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
115102844 (rapgef4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
RA
Vit_b-sht_shell
Motif
Other DBs
NCBI-GeneID:
115102844
NCBI-ProteinID:
XP_029479114
LinkDB
All DBs
Position
LG1:14460078..14520049
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AA seq
1033 aa
AA seq
DB search
MISPKMVAAHTSGHSSASADWIICLDKRPAERSGEDVDIILARLKCVKAFERFHPSLLQQ
ICLCGFYECLEKGITLYRQGDIGTSWYAVISGSLDVKVSETANHQDAVTICTLGIGTAFG
ESILDNTPRHATIVTREFSELLRIDQREFKSMWEKYRQCMAGLLAPPYGVMESGGRSTDR
MSDKENISNNSFGSISKHLNKKSLIESPAKLRPKPISQVPSEKILRAGKVLRDAILSRAP
HMIRDRKYHLKTYRQCCVGTELVDWQMQQSSSVYSRIQAVGMWQVLLEEGVLNHVDQELT
FQDKYLFYRFLEDEQEDAPLPTEEETRESDEELQDTLLLLSQVGPDAHMRMVLRKHPGQR
AADDLEIIYEELLHIKALSHLSTTVKKELAGVLIFESHAKSGTVLFNQGEEGTSWYIILK
GSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRD
VEANTVRLKEHDQDVLVLEKSPSSIQTSTHGTTTTPSHYKYTVMSGAPEKILEHFLEMMR
LDSHLNESDPALDDFVLMHCVFIPNSQLCPVLMAHYHAEASQGSEQERLDYTLNNKRRVI
RLVLQWASVHGDHLQEEDASLAFLEEFFVSVSDDASVIPALKDQLPELEKLVKNSSDDAR
SSPQKHKVLLRQFSMGDEKLQKRQAIKSNDEILFKVYCSDHTYTTIRVTVAASVREVISA
VADKLGSVEDLLLVNLSSAGDKVVLKPNDISVFSTLSINGRLFVCPRDQLDSLTPLPEQE
GPSTGSMGSFELMSSKDLAYQMTVYDWELFHCVHEHELIYHTFGRQNFKKTTANMDLFLR
RFNEIQLWVITEICLCAQLSKRVQMLKKFIKIAAHCKEYKNLNSFFAIIMGMSNPAVSRL
SQTWEKLPSKFKKFYSEFESLMDPSRNHRAYRLTVAKLDPPIIPFMPLLIKDMTFTHDGN
KTFIDSLVNFEKMRMIANTVRIVRYCRSLPFGAEPSQTSKNHPDVRSYVRQLTVIDNQRT
LSQLSHRLEPRRT
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgatctctccgaaaatggtagcggcgcacacctctggccattcctctgcctctgcagat
tggattatttgccttgataaaagacccgctgaacgctctggggaagatgtggacatcatc
ctggccaggctgaaatgtgtgaaggcctttgagcggttccaccctagccttctacagcag
atatgcctgtgtggattctacgaatgtctagagaagggtatcacattataccgtcaagga
gatattggtaccagctggtatgctgtcatctctggctcacttgatgtcaaagtgtcagag
acagcaaatcatcaggatgctgtcacaatctgcactctgggtattgggacagcatttggg
gagtcgatcctggataacacccctcggcacgccaccattgtcacccgggaattcagtgaa
ctcctccgcatcgaccagagggagttcaagtctatgtgggagaaatatcgtcagtgcatg
gctggactgcttgccccaccctatggagttatggaaagtggtggacgtagcactgacaga
atgtctgacaaagagaacataagcaacaactcttttggatccatctctaaacatctgaat
aagaagtcattaattgaaagcccagccaaactccgtcctaaacccatttctcaggtccca
tctgagaagatcctgcgagcagggaaggttctccgtgatgccatcctctccagagctccc
cacatgatccgagacaggaagtaccacctgaagacatacaggcaatgctgtgtgggaaca
gagctggttgactggcagatgcagcagagctcctctgtttactctcgcattcaagcagtg
ggcatgtggcaggtgctgttagaggaaggtgttctcaaccacgtggaccaggagctgacc
ttccaggacaagtatcttttctaccgtttcctggaggatgaacaggaagacgctcccctg
cccaccgaggaggagaccagggagagcgatgaggagctgcaggacaccctcctcctcctc
tcccaggtcggccctgacgcccacatgcgcatggtcctgaggaaacatccaggacagagg
gcagcggatgatttggagatcatttatgaggagctgcttcatataaaggccttatcgcac
ctatccaccactgtaaagaaagaactagccggcgtcctgatctttgagtcccatgccaaa
tctggaacagtcttgttcaatcaaggggaggaaggcacatcgtggtacatcattctaaag
ggctctgtaaacgttgtaatttatggaaagggggttgtttgcacgctgcatgagggagac
gactttgggaagcttgctctggtcaacgatgccccccgtgccgcctccattgttctacga
gaggataactgccacttcctacgtgtggacaaggaggacttcaaccggatcctcagagac
gtggaggccaacacggtgcgtctgaaggaacatgatcaggatgttctggtcctggagaag
agccccagcagcatccagacctctacccacggcaccaccaccaccccctcccactacaaa
tacactgtgatgtcaggggcaccagagaagattctggagcacttcctggaaatgatgcga
ctggactctcacctcaacgaatcagacccagctctggacgactttgtgctcatgcactgc
gtcttcatccctaacagccagttgtgcccagtgctcatggcccactaccacgctgaggcg
tcccagggctcagaacaggagcgtctggactacactttgaacaacaagaggagggtgatc
aggctggtgctccagtgggcctcagtacatggagatcaccttcaggaggaggacgcctca
ctagccttcctagaggagttctttgtgtctgtatctgatgacgccagtgtgattcctgct
ctgaaagatcaactcccagagttagagaagctagttaaaaacagctctgacgatgccaga
tcctctccacaaaagcacaaagtcctgttgcggcagttcagcatgggggatgagaagctg
cagaaacgacaggccatcaagagtaatgatgagatcctgttcaaagtgtactgcagcgac
cacacctacaccaccatccgggtcaccgtggccgcctcagtcagagaggtcatcagcgca
gtggccgacaagctggggtcagtggaggacctcctcctggtcaacctcagttcggccgga
gataaagtggtgctgaagcccaacgatatttcagtcttctccacactcagcatcaacggc
cgtctgtttgtctgccccagggatcaactggattcattgacacccttgccagagcaggaa
gggccctccactggctccatgggcagctttgagttaatgagctcgaaagacctggcctac
cagatgactgtctacgactgggaactcttccactgtgtacacgagcatgagctgatctac
catacgtttgggaggcagaacttcaagaagaccacagccaacatggacctgttcctcagg
aggttcaatgagatccagctgtgggtgatcacagagatctgtctgtgtgctcagctcagc
aagcgcgttcagatgctcaagaagttcatcaagatcgctgcccactgtaaggagtataag
aacctcaactccttcttcgctatcatcatgggcatgagcaacccagccgtgagcagactg
agtcagacctgggagaaactacccagcaaattcaagaaattttacagtgaatttgaaagc
ttaatggacccgtccaggaaccatcgggcgtaccggctcactgtggccaagctggaccca
cccatcattcccttcatgccgctgctgatcaaagacatgacattcactcatgatggaaac
aagacgttcattgacagtttggtcaattttgagaaaatgcgaatgatcgctaatacagtg
aggattgtgagatactgcagaagtctaccattcggtgcagagccgtcgcagaccagtaag
aaccacccggacgtgcggagctacgtgcgccagctgactgttattgacaaccagagaaca
ctgtctcagctctcccacagactggagcctcgcagaacctga
DBGET
integrated database retrieval system
