Oncorhynchus nerka (sockeye salmon): 115104164
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Entry
115104164 CDS
T07952
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00514
Other types of O-glycan biosynthesis
one04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
115104164
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115104164
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115104164
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
115104164
Glycosyltransferases [BR:
one01003
]
Glycan extension
O-Glycan
115104164
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
115104164
NCBI-ProteinID:
XP_029481273
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Position
LG21:21468251..21476218
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AA seq
380 aa
AA seq
DB search
MSKSSGKKTVISITSAGFTCLLLLLVVAQHQRVQVDEVPNQREMGTRSLQSTDTLATDGV
KAAQQQVNLEAQAKKGFSAYFSKLTRGRREADKPAGSAQSATDASPAEDISADDIFIAVK
TTKKFHQSRLNLLLDTWISRNMQQTYIFTDGEDEELKKKMGSHAINTNCSAAHSRQALSC
KMAVEYDKFIESGKKWFCHVDDDNYVNMRTLVKLLSHYPHTQDMYIGKPSLDRPIEATER
LGDNKMRPVNFWFATGGAGFCVSRGLALKMSPWASGGHFMNTAEKIRLPDDCTIGYIIES
VLGVPLTRSNFFHSHLENLQQVSRSELHKQITLSYGMFENKRNIINMKGAFPVEEDPSRF
KSVHCLLYPDTPWCPLQVAY
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagttctggtaagaaaacggttatctctataaccagtgcaggattcacctgc
cttctgttgctcttggtggtcgcgcagcatcaaagagttcaggtagatgaggttccaaac
cagagagagatggggacgcgctcactccagagcacggacaccttggctacggacggagtg
aaggctgctcagcaacaggtcaacttggaggcgcaggcaaaaaaaggattctctgcgtat
ttttccaagttgacccggggacggagagaggcggacaagcctgcagggtccgctcagtca
gcgacagatgcctcccccgcagaggacatcagtgcagatgacatcttcatcgctgtcaag
accacaaagaagttccatcagtctcgactgaatctccttctggatacctggatctctaga
aacatgcagcagacatacatcttcacagatggagaagatgaggagttgaagaagaaaatg
gggagtcacgccatcaacaccaactgttcagcagcacacagccgccaagctctatcctgc
aagatggctgtggagtacgacaagttcattgagtctgggaaaaagtggttctgtcacgtg
gatgatgataactacgttaacatgaggactctggtgaagctgctgtcccactacccccac
acccaggacatgtacattggcaagcccagcctggaccggcccatcgaggccacagagagg
ctaggagacaacaagatgcgaccagtaaacttctggtttgctactgggggagccggcttc
tgtgtgagtcgaggcctggctttgaagatgagcccatgggccagtggcggccattttatg
aacacggcagagaagattcgtctgcctgacgactgcaccatcggctacatcatcgagtcg
gtgctgggggtgcctctgacccgcagtaacttcttccactcccatctggagaacctgcag
caggtgtccagatctgaactccacaaacagatcacattgagttatggaatgtttgagaac
aagaggaacattatcaatatgaaaggggctttcccagtggaggaagacccatcaaggttt
aagtctgtgcactgtttgctgtacccagacaccccttggtgtccgcttcaggttgcctac
tag
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