Oncorhynchus nerka (sockeye salmon): 115104370
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Entry
115104370 CDS
T07952
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain-like isoform X1
KO
K06752
MHC class II antigen
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04145
Phagosome
one04514
Cell adhesion molecules
one04672
Intestinal immune network for IgA production
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115104370
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115104370
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
115104370
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115104370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115104370
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115104370
Exosomal proteins of epithelial cells
115104370
Exosomal proteins of breast milk
115104370
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Gene cluster
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Motif
Pfam:
C1-set
C2-set_2
C2-set_3
MHC_II_beta
Motif
Other DBs
NCBI-GeneID:
115104370
NCBI-ProteinID:
XP_029481671
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Position
LG3:11058213..11063099
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AA seq
275 aa
AA seq
DB search
MHHGSLLGLLGDWMHHGSLLGLLGGWMHHGSLLGLLGGWMHHGSLLGLLGGWMHHGSLLG
LLGGWMHHGSLLGLLGGWMHHGSLLGLLGDWMHHGSLLGLLGGWTFCHSDPGNTSRVQKY
VGFGEFGICNADHYNSQAWKMAIRKAEVETICRYSARFFKLSTLERIVPPIVKARLTKPS
RYGELSMLECSVLGFYPQEVRVSWLRDWLETTTAVISTDTLANGEWSYQLDSYLEFRPQR
GERVSCMVEHPSLDEPLEVVCGERPGEEREYCGLE
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcaccatggatctctgctgggtctattgggtgactggatgcaccatggctctctgctg
ggtctattgggcggctggatgcaccatggctctctgctgggtctattgggcggctggatg
caccatggctctctgctgggtctattgggcggctggatgcaccatggctctctgctgggt
ctattgggcggctggatgcaccatggctctctgctgggtctattgggtggatggatgcac
catggctctctgctgggtctattgggtgactggatgcaccatggctctctgctgggtcta
ttgggtggctggactttctgccattcagacccgggcaacaccagcagggttcagaagtat
gtaggttttggggagtttggcatatgcaatgcagatcactacaacagccaagcttggaaa
atggctataaggaaagcagaagtggagactatttgccgatacagtgcaagattcttcaaa
ctgagcactttggaaagaatagtgcctcccattgtcaaagcccgcctgaccaagccctct
cgctacggggagctgtccatgctggagtgcagcgttctaggcttctaccctcaggaggtg
agggtgagctggctgagagactggctggagaccaccacagccgtgatctccacagacaca
ctggctaacggggagtggagctaccagctcgactcctacctagagttcaggcctcagaga
ggggagagggtaagctgcatggttgagcaccccagcctagatgaaccactggaggtggtc
tgtggtgagagacctggggaagagagggagtattgtggtctggagtga
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