Oncorhynchus nerka (sockeye salmon): 115105065
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Entry
115105065 CDS
T07952
Name
(RefSeq) glycogen debranching enzyme-like isoform X1
KO
K01196
glycogen debranching enzyme [EC:
2.4.1.25
3.2.1.33
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00500
Starch and sucrose metabolism
one01100
Metabolic pathways
Module
one_M00855
Glycogen degradation, glycogen => glucose-6P
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
115105065
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.25 4-alpha-glucanotransferase
115105065
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.33 amylo-alpha-1,6-glucosidase
115105065
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
hDGE_amylase
GDE_C
hGDE_central
hGDE_N
Alpha-amylase
Motif
Other DBs
NCBI-GeneID:
115105065
NCBI-ProteinID:
XP_029482478
LinkDB
All DBs
Position
LG22:13679626..13703247
Genome browser
AA seq
1535 aa
AA seq
DB search
MVRSRQTRVLFLNDMERLERTLFRLEQGFELQFRLGPTLQGRHVQVHTNYPAEGEKFDRL
KFWPLNWINPTGREDDSDKYCKLDLQVAGSYQYYFCAGTEEKTGSGYIVVDPVLRVGADN
HVLPLDCIAIQTYLAKCLGPLDEWQDRLRVAKETGYNMIHFTPLQKLGMSRSCYSLADQL
ELNPEFSTEGKNYTWKDVGNLVEKLKKEWNMVCITDVVYNHTAANSRWLCLHPECGYNLV
NSPHLKPAWVLDRALWHLTCDIADGKYSGHGVPAHIENEHQLHMLRGVLWDEIYPRTKLW
EFYQVNVEKAVEQFRKLLQAGGKAVRLENEDKKRLRILPDPHCRRFGNTVDMTSALETFI
PNGNEPSSIQECCNWLRNRLEELNVERYKEMHYHEEQATNCIVGNVVYERLADHGPKLGP
ITRNHPVVCGYFTFPFEDNLTFDQEMQLMSQTDKACHFLAHNGWVMSDDPLRNFAEPGSN
VYLRRELICWGDSVKLRYGEKPADCPYLWAHMKKYTEITAQHFAGVRLDNCHSTPLHVAE
YMLERARELKPDLYVVAELFTGSEELDNVFVTRLAITSLIREAMSAGDSHEEGRLVYRFG
GEPVGSFVQPSLRPLVPSIAHAMFLDVTHDNECPVQIRSVYDSLPSSAIVSMASCATGST
RGYDELVPHQISVVKEERFYPKWNSEAKPSSAGEVNSQSGIIAGKLALNKLHQELASKGF
SQVYVDQVDEDIVAVTRHCPSTHQSVVAVCHTAFRNPKTYQYRQEVPPMCIPGKIEEVVL
EARTVERITGSYQKDRKSINGLPDHTLEIREHIQLHDSKIVKQDDVMCKGRSEFVQEIEF
EHLSPGSVIVFRVSLDPRSQELVGVLRRHLVQFSDHYKTGSMPDNNAPAILTTPLAAIMS
KVTLADMNVLLFRCDAEEQEDGGGCYNIPSWMSLKYGGLQGLMSVMGDIRPKNDLGHPFC
DNLRRGDWMIDYVSNRLVIKGGALGEVGKWFQAMFTYLKCIPRYLVPCYFDSIIVGAYTT
ALDIVFNKMSNFIQTGSTLVKQLALGSVQMCGVGLHPALPPLAPTLLDVPYRLNGVTNEK
EQCCVSLAAGLPHFAAGMVRCWGRDTFMALRGLMLVTGRHLEARNIILAFAGTLRYGLIP
NLLGQGTGARYNCRDAVWWWLQCIQDYCNMVPDGVNILMCPVSRMYPTNVSQPQPAGAWI
QPLYDVIHEAMTCHMQGTEFRERNAGPQIDRNMTDEGFNVEAKVNEDTGFVYGGNRFNCG
TWMDKMGESDKAHNKGIPATPRDGSAVEIVGLCKSTVRWLVDLHTHGFFPYATLTILSDG
RNISVPYEEWNRKIQANFEIMFYVSHNLQDPNEKHPDLVHKRGIYKDSYGASSPWCDYQL
RPNFAITMVVAPELFTVERAWEALEMAENKLLGPLGMKTLDPDDMKYCGVYDNTLDSENF
NVAKGFNYHQGPEWLWPVGYFLRAKLYFAKKMGPEIYDKTVYLVKNVLSRHNIHFERSSW
KGLPELTNENGQYCPFSCETQAWSIATILEVLHDL
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atggttcgaagcagacagaccagagtactgttcctgaatgacatggagcgactagagagg
actctgttccgactagagcaaggctttgagctccagttccggttggggcccactctgcag
gggaggcatgtgcaggtccacactaactaccctgcggagggagagaagtttgaccggctt
aagttctggcctctgaactggataaacccaacagggagagaggatgactcggacaagtac
tgcaaactggacctgcaggtggcagggtcctaccagtattacttttgtgctgggactgaa
gagaagactggtagtggctacatagtggtggacccagtgctgcgtgtgggtgctgataac
catgtcctacccctggactgtattgccattcagacatacctggccaagtgcctggggcct
ctggacgaatggcaggacaggctcagggttgccaaggagaccggttataacatgatccac
ttcaccccgctgcagaagttagggatgtctcgctcctgctattctctggccgaccaactg
gagctcaacccagagttttctactgaagggaagaactacacctggaaggatgtgggcaac
ctggtggagaaactgaagaaagagtggaacatggtctgcatcactgacgtggtctacaac
catacagctgctaacagtaggtggttatgtctacaccctgagtgtggctataatctggtg
aactcgcctcacctgaagccagcctgggtgctggacagggctctgtggcacctcacctgt
gacatcgcagacgggaagtacagtggccatggtgttcctgctcacatcgagaatgaacac
caactccacatgctgcgaggtgtcctctgggatgagatctaccccaggaccaagctgtgg
gagttctaccaggtgaacgtggagaaggctgtggaacagttcaggaagctgcttcaggca
ggaggcaaagcagtgagattagagaatgaggataagaagcgtctgaggatcctcccggac
ccccattgtcgacgcttcggtaacaccgtggacatgacctcagccttggagaccttcata
cccaatggcaatgagccctcatccatccaggagtgttgtaactggttgaggaacagactg
gaggagctgaatgtggagcgctataaggagatgcactaccatgaggaacaggccaccaac
tgcattgttggaaatgtagtgtacgaacgccttgcagaccacgggcctaagttgggacct
attaccaggaaccatccagtggtgtgtggatatttcaccttcccgtttgaggacaacttg
acctttgaccaggaaatgcagctgatgagccagacagacaaagcgtgtcacttcctggcc
cacaacggctgggtgatgtcagacgaccccctgaggaactttgcagagccaggctctaat
gtgtacctgaggagggagctgatctgctggggagacagtgtgaagctgcgttacggtgag
aaaccagcggactgtccctacctgtgggcccacatgaagaagtatacagagatcacagcc
caacactttgcgggcgtgcgcttggacaactgtcactccactcctctacatgtggccgag
tacatgctggagagagctcgcgagctgaagcctgacctgtatgtggtggctgagctgttc
acgggcagcgaggagctggacaatgtctttgtcactaggctggccattacctccctcatc
agagaggctatgagtgcaggggacagtcatgaggagggcaggctggtctacaggtttggt
ggagagcctgtgggctctttcgtccagcccagcctcagacctctggtgccctctatcgcc
catgccatgttcctggatgttactcatgacaacgagtgccctgtccagattcgctctgtg
tacgactccctcccgagctctgctatcgtctccatggccagttgtgctacaggcagtact
agaggatatgatgagctggtccctcaccagatctctgttgtgaaggaggagcgcttctat
ccaaagtggaactctgaggccaagccctcctctgcaggggaggtgaactcccagagtggt
atcatcgctgggaaactggccctcaacaagctgcaccaagaactggcctctaagggcttc
tcgcaggtatatgtggaccaggtggatgaggatatagtggcagtaaccagacattgcccc
agcacacaccagtctgtggtagctgtgtgtcacactgccttcaggaaccccaagacctat
caatatagacaggaggttccccccatgtgcatcccaggtaaaatagaggaggtggtactg
gaggccaggaccgtggagaggataactgggtcgtaccagaaagaccggaagagcatcaac
ggtctccctgaccacacattagagatcagagaacacatccagctacatgacagcaagatt
gtgaaacaggatgatgtcatgtgtaagggccgcagtgaatttgtccaggagattgaattc
gaacacctcagccctggtagtgtgatagtgttcagggtgagtctggaccccaggtcccag
gagctggtgggggttctgaggagacacctggtccagttcagtgaccattacaagacgggc
agtatgcctgacaacaacgccccagccatactcactactcctctggcagctattatgtcc
aaggtgaccctggcggacatgaacgtgttgctgttccgttgtgacgctgaagagcaggag
gacggtggaggctgctacaacatcccttcctggatgagtctcaagtacggaggcctgcaa
ggtctgatgtcggtgatgggggacattcgtcccaaaaacgacctgggacaccccttctgt
gacaacttgagacggggagattggatgatcgactacgtcagcaaccggctggtcatcaag
ggaggagcactgggcgaggtaggcaagtggttccaggccatgtttacctatctgaagtgc
atccctcgctacctggtgccatgctacttcgactccatcattgttggggcttataccacc
gccttggatattgtgttcaataaaatgtcaaacttcatccagaccggttccaccctggtg
aagcagttagctctgggctcagtacagatgtgtggagtgggcctgcaccccgcccttccc
cccctggcacccacgctgcttgacgtgccctaccgtctcaatggggttaccaacgagaaa
gagcagtgctgtgtgtcactggctgcaggtcttcctcattttgcggctgggatggtgcgt
tgctggggccgggacactttcatggcactgcgaggtctgatgctggtgacaggaagacac
ctggaggccagaaacataatcttggcgttcgctggcaccctgaggtatggcctgatcccc
aacctgctgggacaggggactggcgcccgctataactgccgtgacgcagtatggtggtgg
ctgcagtgcatccaggactactgcaacatggtgcctgacggagtcaacatcctcatgtgc
cctgtgtcaaggatgtatcccaccaatgtgtcccagccacagcccgctggagcctggatc
cagcccctgtatgatgtcattcatgaggcgatgacgtgtcatatgcaggggacggagttc
agggagaggaacgctggaccacagatagatcgcaacatgaccgatgaagggtttaatgtt
gaggccaaggtgaatgaagacactgggtttgtctatggaggaaatcgcttcaactgcggg
acatggatggacaagatgggagagagtgacaaggctcataacaaaggaatcccagctaca
cctagggatggctctgcagtggagatagtgggtctctgtaagtccacagtgcgctggtta
gtggaccttcatacgcacggcttcttcccttacgcaaccctcaccatccttagtgatggt
cgtaacatctctgtgccctatgaagagtggaacagaaagatccaggcgaactttgagatt
atgttttacgtgtctcacaaccttcaggaccccaatgagaaacacccagacctggtgcac
aagagaggcatctacaaggacagctatggggcctccagtccctggtgtgactaccagctc
aggcccaactttgctatcaccatggtggtggctccagagctgttcacagtggaaagggcc
tgggaggcactagagatggcagagaataagctgctcggccccctgggaatgaagacctta
gatccagatgacatgaagtactgtggtgtctacgataatactctggatagtgagaatttc
aatgttgctaagggcttcaactaccatcaaggacctgagtggctctggccagtcggctat
ttcctacgggccaaactgtactttgccaagaagatggggccagagatatacgacaagact
gtgtacctggtgaagaatgtcctctctaggcataacatccacttcgagagatcatcttgg
aagggtctacctgagctgactaatgagaatggccagtactgtcccttcagctgtgagact
caggcctggtctatcgccaccatactggaggtgctgcatgatctgtag
DBGET
integrated database retrieval system
