Oncorhynchus nerka (sockeye salmon): 115105078
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Entry
115105078 CDS
T07952
Symbol
mmp16
Name
(RefSeq) matrix metalloproteinase-16 isoform X1
KO
K07996
matrix metalloproteinase-16 (membrane-inserted) [EC:3.4.24.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115105078 (mmp16)
Peptidases and inhibitors [BR:
one01002
]
Metallo peptidases
Family M10
115105078 (mmp16)
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
DUF3377
PG_binding_1
Astacin
DUF4953
Metallopep
Peptidase_M66
Reprolysin_3
Peptidase_M54
Motif
Other DBs
NCBI-GeneID:
115105078
NCBI-ProteinID:
XP_029482510
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Position
LG22:14312559..14384738
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AA seq
613 aa
AA seq
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MIVLAFHTRRRLNSFYLGTLCLQFLLWILCAVNGEEQPFSVETWLQTYGYLPPTDPRMSV
LRTAQTMQSAIAAMQRLYGLNVTGSLDRNTIDDYTVSWMKKPRCGVPDQLGGASKFSVRK
KRYALTGQKWQHKHITYSIKNVTPKVGAEETHDAIRRAFDVWQNVTPLRFEAVPYSDLER
TKKDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDG
KMGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMDTENFKLPHDDLQGIQKIYGPPD
KVPQPTKPLPTAPPHRSQPPSDPRKPDRQTRPPRVPTGDKPSQPNAKPNICDGGFNTLAI
LRREMFVFKDHWFWRVRDNAVMTGYPMLINVFWRGLPPKIDAVYENSEGKFVFFKGKQFW
VFKDTMLQPGYPQDISMFGHGMPTQSIETAVWWEDVAKTYFFKGDRYWRYNEDMRTMDPG
YPKSITVWKGVPDSPQGAFVDKANGFTYFYKGKEYWKFNNQRLRVEPGYPRSILKDFMGC
DLTPIDPEWPPTEDVDIVIELENEANTVKAIAIVIPCVLALCLLVLVYTVFQFKRKGTPR
HILYCKRSMQEWV
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgttagcatttcacactagaagacgtttgaatagcttttatttagggacgttg
tgcttgcaattcttgctgtggattttatgtgccgtgaatggagaggaacaaccgttcagc
gtagagacatggctccagacgtatggctaccttccccctacagaccccaggatgtcggtc
ctgcggacggcccagaccatgcagtctgctatcgctgccatgcagcgtctctatggcctc
aacgtcacaggatcgctggacaggaacacgatagacgattacacagtaagctggatgaag
aagccccgatgtggtgtaccagaccagctaggaggggcgtccaaattcagtgtccggaaa
aagcggtacgccctcacggggcagaagtggcagcataagcatatcacatacagcataaag
aacgtcacacccaaggtgggcgcagaggaaacccatgacgccatccggcgggcgttcgat
gtgtggcagaacgtgactccgctccgcttcgaagccgtcccctacagcgacctggagcgt
accaagaaggacgtggacatcaccatcatctttgcctcgggtttccacggcgacagttcg
ccctttgacggagagggaggcttcctggcccacgcctacttcccgggccccggaatcgga
ggggacacccactttgactcagacgaaccctggaccctgggcaacccaaaccacgacggt
aagatgggtaatgatctgttcctagtggcagtccatgagctgggccatgcccttggtttg
gaacactccaacgatcccacagccatcatggcccccttctaccagtacatggatacagag
aacttcaagctgccccacgacgacctccagggcatccagaagatctacggtccaccagat
aaggtaccccagccgaccaagcctttaccaacagcccccccacaccgctcgcaacccccc
tcggaccctcgcaagcccgacaggcagacgcgaccccccagggtacctacgggggacaag
cccagccagcccaacgccaagcctaacatctgtgatgggggcttcaacaccctggccatt
ctgagacgagagatgttcgtgttcaaggatcactggttttggagggtacgggacaacgca
gtgatgacggggtaccccatgctcatcaatgtcttctggagaggactgccccccaagata
gacgctgtctacgagaacagcgaggggaaatttgtcttcttcaaagggaagcagttctgg
gtgttcaaggacaccatgctccagcccggctacccccaggacatctctatgttcggccac
ggcatgccaacccagagcatcgagaccgccgtctggtgggaggacgtagccaagacatac
ttcttcaaaggggacaggtactggcgttacaatgaggacatgaggacaatggacccaggc
taccctaaatccatcactgtctggaagggcgtcccagactctccacaaggagccttcgta
gacaaagccaatggtttcacctacttctacaaagggaaggagtactggaagttcaacaat
cagaggttgcgagtcgaacccggttacccccgctccatcctgaaggacttcatgggctgc
gacctgacccccatcgaccccgagtggccgcccacggaggacgtcgacattgtcattgag
ctggaaaacgaggccaacacagtgaaggccattgccatcgtgatcccctgtgtcctggcg
ctctgtcttcttgtcctggtctacaccgtcttccagtttaagaggaagggaacgcccaga
cacatactgtactgcaaacgctccatgcaggagtgggtgtga
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