KEGG   Oncorhynchus nerka (sockeye salmon): 115105326
Entry
115105326         CDS       T07952                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-Q alpha chain-like
  KO
K06752  MHC class II antigen
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04145  Phagosome
one04514  Cell adhesion molecules
one04672  Intestinal immune network for IgA production
one05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    115105326
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115105326
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    115105326
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    115105326
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:one04147]
    115105326
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115105326
  Exosomal proteins of epithelial cells
   115105326
  Exosomal proteins of breast milk
   115105326
SSDB
Motif
Pfam: C1-set Ig_3 ig MHC_II_alpha C2-set_2 Ig_2 C2-set_3
Other DBs
NCBI-GeneID: 115105326
NCBI-ProteinID: XP_029483109
LinkDB
Position
LG22:complement(38336566..38342193)
AA seq 249 aa
MSFEMNYSEIVLILTGAICTSAEIHHEIHFIYGCFESSDPAVGLEIDGDEVFYGDFNKNS
NTCLIADVVFTLPKSISITPEDKERACEYATISRVWCKNCIAWGKQSEPKIPKIKDAPES
TIYPRDEVELGVENTLICFVNDFFPPPVKVNWTKNGMEVTEGLSLSRYYPNKDGTFHQFS
SLSFTPQKEDVYICAVAHTALKDPKTREYKVSGSSVGPGPAVFCGVGLTLGLLGVATGMF
FIYKGKRAT
NT seq 750 nt   +upstreamnt  +downstreamnt
atgagcttcgagatgaactactcagagattgtactgattctcactggagccatttgcact
tctgcagaaattcatcatgaaattcactttatctacggatgctttgagtcaagtgatcct
gcggtgggacttgagattgatggagatgaagtcttctatggcgacttcaataaaaacagt
aatacgtgtctaatagcagatgtagtgtttacattacctaaatccatatctattacacca
gaggacaaagaaagggcttgtgaatatgctaccattagcagagtttggtgcaaaaactgc
atcgcatggggcaaacagtctgaaccgaaaataccaaaaatcaaagatgcccctgagagc
accatctaccccagggatgaggtggaactgggggtggagaacaccctcatctgctttgtg
aatgatttctttcccccacctgtcaaagtcaattggaccaagaatggaatggaggtgact
gagggattgtctctcagtcgttactatcctaataaagatggaacgttccaccagttctcc
agcctgagtttcaccccacaaaaggaagacgtctacatctgcgctgtggcgcacacggcc
ctgaaggaccccaaaaccagggaatataaggtcagtgggtccagtgttggtcctggtcct
gctgtattctgtggagtgggcctcactcttgggctgctgggggtggctactggaatgttc
ttcatctacaaaggaaagagagccacttag

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