Oncorhynchus nerka (sockeye salmon): 115106102
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Entry
115106102 CDS
T07952
Symbol
bbs10
Name
(RefSeq) Bardet-Biedl syndrome 10 protein
KO
K19401
Bardet-Biedl syndrome 10 protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115106102 (bbs10)
Cilium and associated proteins [BR:
one03037
]
Primary cilia and associated proteins
BBS-CCT complex
115106102 (bbs10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
115106102
NCBI-ProteinID:
XP_029484528
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All DBs
Position
LG23:complement(35178370..35182410)
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AA seq
626 aa
AA seq
DB search
MGMRLQPRCLQLDSVLQTVSVLEAVIRRSFGPDGGQVLFTRDTGQTLLTRHGTRILTALR
VEHPLARMVVECVRRHSSVTGDGSKTFVLLLASLLREIQKHTRKARQEGAGAKRLAEALL
AFGLDELSDVITVAVAPHGSSLSDPHTPGQTDTHTLCRLLSAFLHTRISPTHAEIISQLT
CELLSHWSCHGDFINEHFPALHTAVSGFPIGCSRLLEGQVVHADFSTPLPLRDHGPIRAL
AVTEPLEPSLLIGGTVLELGGANREIESVCVRLGRRLDNVCVILQHLGVSLLLSSVRQSE
AFLAAVGRYGVCVLECVCEDDLTLFSVLSGAQPVSDWAVIGQEHVATVTFCRPLVLGAHR
FVNLGFPKAEDRGRPHSLVVCGLTEGQTEQSVCAVRDALHMLRTTWGPKHRTRATERTAR
TDVMEPCCVISVGGTFEFLLHHTLLQRKHGHTHSVTHRHTHTPSHHTDTHTPSHTDTHTQ
SNADTHTLSHLDNPAVSGMLAEALLSVPRQIYSHNPRHYLEAHAHTLSCMRNHGNSTYPP
EISAVLAADGSNMVQADTGSGSMSGSGVKEVTVWSSSGSSSGVESVSCKYQLILAVLQCL
RSLLSVDTVLHANTSHACQREEEEGD
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggggatgcggttgcagcctcggtgtctgcagctggactccgtactgcagacagtgagt
gtcctggaggctgtgatccggaggagctttggtcctgatggaggacaggtgctgttcaca
cgggacacggggcaaactctgctgacacgccacggaacacgcatcctcacagccctgcgg
gtggaacacccgctggccaggatggtggtggagtgtgtgaggagacacagctcggtgaca
ggagatggctccaagaccttcgtcctgctgctcgcctcattgctacgggagatacagaaa
cacacccgaaaagcccgccaggaaggcgcaggcgccaagcgtttggctgaagctctgttg
gccttcggattggacgagctcagtgatgtcatcactgttgcagtggctccacatggctcc
tccctttcagacccacacaccccaggacaaacagacacacacactctgtgccgcctactc
agtgctttccttcacacccggatcagccctactcatgctgaaatcatcagccaactgacc
tgtgagctgctctcgcattggagctgccatggcgacttcattaacgaacacttccctgct
ctgcacacagcagtatcaggcttccctattggctgttcccgtctgctggagggccaggtc
gtacatgcagatttctctacacccctcccactccgcgaccatggaccaatcagggcccta
gcggtgacggaacccctagaacccagcctgctgattggtggaactgtgctagagctgggt
ggggctaatagagagatagaaagtgtgtgtgtgagattagggaggaggttagacaatgtg
tgtgtcattctacagcatctaggagtgtctctgctcctctcatcagtcagacagtcggag
gccttcctggctgcagtggggaggtatggggtgtgtgtgttagagtgtgtgtgtgaagac
gacctcaccttgttctctgtgctcagtggagcccaacctgtctcagactgggctgtgatt
ggacaggaacacgttgctacggttaccttctgccggccgctggtgctgggagctcacagg
ttcgtcaatttggggtttcctaaggcagaggacaggggcagaccccacagtctggttgtg
tgtggactgaccgagggccagacggaacagagtgtgtgtgcagtacgagatgctctacac
atgctgcgtactacctggggccccaaacacaggactagagctacagagagaacggcacgc
acagacgtgatggagccttgttgtgtcatttccgtgggcgggacttttgagttcctgtta
caccacacactcctacagcgcaaacacggacacacacactctgtcacacacaggcacaca
cacactccgtcacaccacacagacacgcacactccgtcacacacagacacgcacactcag
tcaaacgcagacacacacactctgtcacacttggacaaccctgccgtctcggggatgcta
gcagaggccctactgagtgtgcccagacagatctactcccacaatcctcggcactacctg
gaggctcacgcacacactctcagttgcatgcgtaaccatggtaactctacgtaccccccg
gaaattagtgctgttctggcagcggatggttctaatatggtccaggctgacactgggtca
gggtctatgtctgggtcaggggtaaaggaggttacagtttggtcaagttctggctctagt
tcaggtgtggagtcagtgtcctgtaagtatcaactgatcctggctgttctacagtgtctc
aggagtctactgtctgtggacactgtactacacgctaatacctcacacgcctgtcagaga
gaagaggaggagggtgactga
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