Oncorhynchus nerka (sockeye salmon): 115106515
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Entry
115106515 CDS
T07952
Name
(RefSeq) pleckstrin homology domain-containing family M member 1-like
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04140
Autophagy - animal
one05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115106515
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115106515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115106515
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115106515
Membrane trafficking [BR:
one04131
]
SNARE
SNARE associated proteins
Others
115106515
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
115106515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Motif
Other DBs
NCBI-GeneID:
115106515
NCBI-ProteinID:
XP_029485181
LinkDB
All DBs
Position
LG23:complement(11410220..11424879)
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AA seq
1048 aa
AA seq
DB search
MLATQTPDTGPEAKDVKQWIKEKLAWSLKALQKRYVTTDVVVTSEDGDANLLCCALEAIF
IHGIKSKYVRSEAGGRGRKGGSRGALPQPVFWSLLKTVTHGDVITELEKLSFVGTDTGRC
RAWLRLALNHGLMECYLASLFREGSKLQAHYQPSALLLDPEEREVLLSYIQGLASLTFNL
SYKSAVLNEWTTTPLALAGLCPAAQAEALDLPFLTKRKESYDTVSQSSGGSDTVEVQRGG
PGVLGKGIGGVSGFKTPLNSSNLSLDTTGSSQLSSSLSSDSLLQGHDPKSPDKEPWPCDL
EISNMENNGNAKRPLKDVLADFRESAHSSQDSMREDSYASTPGADHLSENTAFSGSDSET
QGHVTHLTGPSNPASLGSDQEEPSTKTHAPSNVYSHIEGPSTEMPQEKKTEYSVKSASEP
SAHMNLHRTTSVLSRMVSTDSVTHSHSWISEDDIYKPHLEELADPDESLLGSGPACVNGF
TSPPLEPETPQSPPSVVHRRQIGLSNPFRGLLKLGHLERRGTVGMWRDYYCELSPFEFRL
YLNAEERTCCDNCSLLRCEDACVTSAEGRFDLSFPGKRLLMRAANCDEAEDWVDRITEAV
NKCRPLHLLDDQWEVLQLSDSSVTPDEPPKSSPSSPSSVPASPDRGGAVVEQVQQLELDW
TRPTDPESDAIKEAVLYFCQDSEPRIWTPLVFSLSLETLKGFRMQDGQKVLRCSHPIEGI
RDVVPDVSMGGPAFFRVVTARDTLKLRAKSSEEAQAWRGLIRGALDSYLESGEDWEPESP
GVAPGAGGNTHRLVQHRLKGDGVLLAHLCTVPTEKGLDLQGFKCAGCPKVIGVSRGKARL
CEFSGQYYCDACHQGDTIVIPSRMVHNWDLAPREVSRHALKLLAEIEHEPLLNLDLLNPD
LWEHAEAMAQAQSHRQRLRLLGDYLLTCRSGACKNIQTRLGPRTYLLESSHLYSVMDLRQ
IAEGMYVAYLNTLIQFASNHVHHCDLCTQRGFICQICHTSDIIFPFQFDTTTRCKECKAV
SHVTCKAKSPSCPRCLRLQRYLERDLQD
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgttagccacacagaccccagatacagggccagaggcaaaagacgtcaagcagtggatt
aaggagaagttggcgtggtcactcaaggcgttgcagaagcgctacgtgacaaccgatgtc
gtggttaccagcgaggatggtgacgccaatctgctgtgctgcgcactggaggccatcttt
atccacggcatcaaaagcaaatatgttcgctccgaggctgggggacgtggcaggaaaggg
gggtcccggggagccctcccccagcctgtgttctggagcctcctcaagactgtcactcac
ggtgacgtgatcacggagctggagaagctgagcttcgtgggtacggacacgggtcgttgc
cgggcctggctgcggctggccctcaaccacggcctaatggagtgctacctggcctccctg
ttccgtgagggctccaaactgcaggcccactaccagccctccgccctgctgctggaccct
gaggagcgtgaggtgctgctcagttacatccagggcctggcctccctcaccttcaacctc
tcttacaaatcggccgtgctcaacgagtggaccaccacccctctggctctggctggcctc
tgccctgctgcacaggctgaagcgctcgacctcccctttctcaccaagcgcaaggaatcc
tatgatacggtgtcacagtcatccggcgggtcggatacagttgaagtgcagcgagggggg
ccaggggtgctggggaaggggattgggggggtctccgggtttaagaccccactgaattcg
tccaatttgagcctggacaccacagggtcgtctcagctctcctccagtctgagctctgac
agtctgcttcaaggccacgaccccaagagcccagacaaggagccctggccatgtgacctg
gaaatctccaacatggagaacaatggcaatgccaagaggcctctcaaagatgttctggca
gacttcagggagagtgcccattccagtcaggactccatgcgcgaggattcgtacgcgtcc
accccaggcgcagaccacctctctgagaacactgccttcagtggctccgacagcgagacc
cagggacatgtcacacatctcactggcccctctaaccctgcttcactggggtcagaccag
gaggagccgtccaccaagacccacgccccctccaacgtgtactcgcacattgaagggccc
tccactgagatgccacaggagaaaaaaacagaatattctgttaagagcgcctcggagcct
tcagcccacatgaacctacaccgcactaccagcgtgctcagtcggatggtgtctacagac
tcagtcacacattcccactcctggatctctgaggatgacatctataagccacaccttgag
gaactggctgaccccgatgagtctttgctagggtctggcccagcttgtgtgaacggattt
acctctccccctctagagcccgagaccccccagtccccccccagcgtggtccaccgcagg
cagataggcctctccaaccctttccgtggactactgaagctgggacacctggagcggcgg
ggcacggtaggcatgtggcgcgactactactgtgagctctcgcccttcgagttccgcctc
tacctgaatgcagaggagcgcacctgctgcgacaattgctccctgctgcgttgcgaggat
gcctgcgtcacctcggccgagggccgcttcgacctttccttccctgggaaaaggctcctt
atgcgggcggccaactgcgatgaggccgaggactgggtggaccgcatcactgaagccgtc
aacaagtgccgcccgcttcacctcctcgatgaccagtgggaggtgctgcagctctctgac
agcagtgtaaccccggatgagcccccaaaatcttccccttcatccccctcctccgtaccc
gccagtcccgatcgagggggtgctgtggttgagcaggtgcagcagctggagctggactgg
acgcgtcccacagaccccgagtcagacgccattaaggaagcggtgctgtacttctgccag
gactccgagcctcgcatctggactcctctcgtcttctccctctccttagagactctcaag
ggcttccggatgcaagacgggcagaaggtgctgcgctgctcccaccccatcgaggggatc
cgggacgtggtcccagacgtttctatgggtggaccagccttctttagggtcgtaacggcc
agggatacgctcaaactgagggccaagagctccgaggaggcacaggcctggaggggcctc
atcaggggagccctggactcctacctggagagtggagaagactgggagcctgagagcccc
ggggtggcccctggggcgggagggaacacccacagactggtgcagcatagactgaagggg
gacggggtgctgctggcccatctatgcacagtgcccacagagaaggggttggaccttcag
ggcttcaagtgtgcaggttgtccaaaggtgataggcgtctcccgagggaaagccagactg
tgtgagttttcagggcagtactactgcgacgcttgtcaccagggcgacaccatcgtcata
ccctcccgcatggtgcacaactgggacctcgcacctcgggaggtctccaggcatgccctt
aagctgctggctgagattgaacatgagcccctgctcaaccttgaccttttgaaccctgac
ctgtgggagcatgccgaggccatggcccaggcacagagccacagacagaggctgcgtctc
ctaggagactacctgctcacctgccgcagcggagcatgcaagaacatccagaccagactg
ggtccaaggacatacttattggaatcaagccatctctacagtgtcatggacttacgacag
atagcggagggaatgtatgtggcctacctgaacactttgatccagtttgcctccaaccac
gtccaccactgtgacctttgcacccagaggggcttcatctgccagatctgtcacactagt
gacatcatcttccccttccagtttgacaccaccaccaggtgtaaagagtgtaaggccgtg
tctcacgtaacctgcaaggccaagtcgccttcctgtccacgatgcctgcgtcttcagagg
tacctcgagagagatctgcaggactaa
DBGET
integrated database retrieval system
