Oncorhynchus nerka (sockeye salmon): 115107897
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Entry
115107897 CDS
T07952
Name
(RefSeq) thyrotropin receptor-like
KO
K04249
thyrotropin receptor
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
one04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115107897
04081 Hormone signaling
115107897
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
one04030
]
115107897
G protein-coupled receptors [BR:
one04030
]
Rhodopsin family
Peptide
Thyrotropin
115107897
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
LRR_4
7TM_GPCR_Srsx
Comm
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
115107897
NCBI-ProteinID:
XP_029487505
LinkDB
All DBs
Position
LG24:19250743..19285612
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AA seq
818 aa
AA seq
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MTENDRHRLQVITCALFTLVTLPIKTLGDTDSCPTVCECSEWKTYTISCFDIDVIPTFPT
STETIWLLETRLTSVPGDVFSNLVNISRIYISVDVTLAGLERHSFYNLKKITHIEIRNAK
SLSYIDPEAFKNLPNLKYLGIFNTGLTLFPDLTNIHSDDMNFILEIADHPYISEVPANSF
RGITNQVLTVMLYSNGFTDIQHHAFNGTKLDAVYLHRNKYLTKMDERTFAGTVSGPMLLD
VSLTGVSSLPTAGLESLRELMARNAWNLKKLPPIKTFKHLVTADLTYPSLCCGFKNLKKK
RGYLEYIICNLTAFYDQHQKRSVGPLRVPSLQIDPASDTAADRHQKRSVGPLTVPSLQED
PMGDAADQQPSEVGFRDGVSRDTQGDPRRDFQSSLHYHAYFGGQPDDDVGFGETLKNPQE
DTSQDFDSRYDYVVCEEGEEVTCAPAPDEFNPCEDIMGFSFLRVSVWFVSLLAVVGNMVA
LLVLLTSHYKLSVSRFLMCHLAFADLCMGIYLLLIASVDLHTRAEYYNHAIDWQTGPGCG
LAGFFTVFASELSVYTLTVITLERWYAITFAMRLDRKLRLPHAAAVMLAGWLFCLLLAML
PLVGVSSYQKVSICLPMDTQSTVAQVYIVSVLILNILAFLVICACYIKIYCTVHNPHYRS
GSKDTNIAKRMAVLIFTDFLCMAPISFYAMSAVLDRPLITVSNSKILLVLFYPLNSCANP
FLYAIFTKAFRGDVFILLSKVGLCQRRAQLFRGQTVSSKGSSGVCHQGRRGKKRDKNEKG
TGGPEEVPIHLQDRSGSGQTYLQPTSQQPSPENRSLDT
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaacgaccgacaccgcttgcaggtgataacatgtgcgctgtttaccctcgtc
acgttacctatcaaaaccttgggggacaccgactcctgccccactgtttgcgaatgctca
gagtggaagacttacactatctcttgctttgacattgatgtcattcccacatttcctaca
agcacagagacaatatggcttctggagacgcgtctgacatcagtgccaggagatgttttc
tccaacctagtcaacatctcaaggatatacatatcagtggacgtaacactggcaggactt
gagaggcattccttctacaatctaaagaaaattacccacatagagatccggaacgcaaag
agtctgtcgtacatcgacccagaagcatttaagaaccttccaaacctgaaatacctgggt
attttcaatactggcctcaccctctttcctgatctcaccaacatccactcagatgatatg
aactttatacttgaaatagctgatcatccctacatttctgaggtcccagcaaactcattc
cgcggtattaccaaccaagtgctgacagtgatgctgtacagtaatggcttcaccgacatt
caacatcatgctttcaacgggaccaaactggatgctgtgtacctccataggaacaagtat
ctgaccaagatggatgaaagaacgtttgctggcaccgttagtggcccaatgcttcttgac
gtgtccctgacgggggtgtcatccctccccacagcaggcctggaatctctcagggagctg
atggcccgcaacgcctggaacctgaagaagctcccgccaatcaaaaccttcaaacacctg
gttaccgcagacctcacctacccctccctgtgctgtggcttcaagaacctcaagaagaag
agaggataccttgagtacatcatctgcaacctgacagctttctacgaccagcatcaaaag
agatcagtaggtcccctcagagtcccatctcttcaaatagacccagcctctgacactgca
gcagaccggcaccagaagagatccgtgggtcccctcacagtcccatccctccaagaggat
cccatgggggatgcagctgaccagcagcccagcgaggtgggcttcagagatggggtgtcc
agagacacccagggagatccccggagagacttccaaagcagcctccactaccacgcttac
ttcggcggccagccggatgatgacgtgggcttcggggagacactgaagaacccccaggag
gacaccagccaggacttcgacagtcgctacgactacgtggtctgtgaggagggcgaggag
gtgacctgcgcccctgcgccggacgagttcaacccgtgcgaggacatcatgggcttcagc
ttcctgcgggtgtctgtgtggttcgtgtccctactggctgttgtaggcaacatggtggca
cttctagtcctcctcacctctcactacaagctctccgtctcccgctttctcatgtgtcac
ctggccttcgctgacctctgcatggggatatatctcctcctcatcgcctctgtggacctt
cacacccgggcagagtactacaaccacgccatcgactggcagaccgggccgggctgcggg
ttagcggggttctttaccgtgtttgccagcgaactgtcggtgtatacgctgacggtgatc
acgctagagaggtggtatgcaataacgttcgccatgaggctggacaggaagttgcgtctg
ccccatgcagctgctgtgatgctggctggatggttgttctgcctcctcctagcgatgctc
cccctagtgggggttagtagttaccagaaggtcagtatctgcctacccatggacacccag
tccaccgtggcccaggtgtacattgtctcagtccttatcctcaacatcctggcatttctg
gtcatctgtgcctgttacatcaagatctactgcactgtccataacccacactaccggtcc
ggctccaaagacaccaacatcgccaaacgcatggccgtcctcatcttcacggacttcctg
tgtatggcgcccatctctttctatgccatgtcggcggttctggaccggcctctcatcact
gtgtccaactctaagatcctgctggtgctcttctaccctctcaactcctgtgccaatccc
ttcctgtacgccatcttcaccaaggccttcaggggggatgtctttatcctgctcagtaag
gtggggctgtgccagcgccgggcacagctcttcagagggcagacggtcagttcgaagggt
agcagtggggtatgtcaccagggccggagaggtaagaagagagacaaaaacgagaaggga
acaggaggaccagaggaggtacccatccacctgcaggatcgttctgggtctggtcaaacc
tacctccaacccacctcccagcaacccagtccggagaaccgtagcctggacacatga
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