Oncorhynchus nerka (sockeye salmon): 115109130
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Entry
115109130 CDS
T07952
Name
(RefSeq) rap guanine nucleotide exchange factor 4-like
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04081
Hormone signaling
one04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
115109130
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
115109130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115109130
Membrane trafficking [BR:
one04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
115109130
SSDB
Ortholog
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GFIT
Motif
Pfam:
RasGEF
DEP
cNMP_binding
RasGEF_N
RA_2
Vit_b-sht_shell
RA
Motif
Other DBs
NCBI-GeneID:
115109130
NCBI-ProteinID:
XP_029489602
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All DBs
Position
LG3:36026982..36078852
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AA seq
859 aa
AA seq
DB search
MAGLLAPSYGVMESGGPSPDRMPDKENISNNSFGSISKHLSKVPSEKIMRAGKVLRDAIL
SRAPHLIRDRKYHLKTYRQCCVGTELVDWQMQQSSCVRSRIQAVGMWQVLLEEGVLNHVD
QELTFQDKYLFYRFLDDEQDDAPLPTEKEARESDEELQDTLLLLSQIGPDAHMRMILRKQ
PGQRTADDLEIIYEELLHIKALSHLSTTVKKELAGVLIFESHAKAGTVLFNQGEEGTSWY
IILKGSVNVVIYGKGIVCTLHEGDDFGKLALVNDAPRAASIVLRDDNCHFLRVDKEDFNR
ILKDVEANTVRLKEHYQDVLVLEKSPSSQASTHGSTTTTATSSHYKYTVMSGTPEKILEH
FLEMMRLDSHLNESDPALDDFVLMHCVFIPNSQLCPVLMAHYHAEASQGSEQERLDYTLN
NKRRVIRLVLQWASVHGDHLQEEDASLAFLEEFFVSVSDDARVIPALKDQLPELEKIVKN
NSDDARSSQQKHKILLRQFSMGDEKLQKRQAIKSNDEILFKVYCSDHTYTTIRVPMAASV
SEVISAVADKLGSAEDLLLVNLSSAGDKVVLKPNDISVFSTLSINGRLFVCPGDQLDSLM
PLPEQEGPSTGSLGSFELMSSKDLAYQMTLYDWELFHCVHEHELIYYTFGRKNFKKTTAN
MDLFLRRFNEIQLWVITEICLCAQLSKRVQLLKKFLKIAAHCKEYKNLNSFFAIIMGMSN
PAVSRLSQTWEKLPSKFKKFYSEFESLMDPSRNHRAYRLTVAKLDPPIIPFMPLLIKDMT
FTHDGNKTFIDSLVNFEKMRMIANTVRIVRYCRSLPFSAEPSQTSKNHLDVRSYVRQLTV
IDNQRTLSQFSHRLEPRRT
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggctggactgctagccccatcttatggagttatggaaagtggtggacccagccctgac
agaatgccggacaaagagaacataagcaacaactcttttggatccatctctaaacatctg
agtaaggtcccatctgagaagatcatgcgagcagggaaggttctacgtgatgccatcctc
tccagagctccccacctcatccgagacaggaagtaccacctgaagacatacaggcaatgc
tgtgtgggaacagagctggttgactggcagatgcagcagagctcctgtgttcgctctcgc
attcaagcagtgggcatgtggcaggtgctgctggaggaaggagttctcaaccacgtggac
caggagctgaccttccaggacaagtatctgttctaccgtttcttggatgatgagcaggat
gacgctcccctgcccactgagaaggaggccagggagagcgatgaggagctgcaggatacc
ctcctcctcctctcccaaataggccctgatgcacacatgcgcatgatcctgaggaaacag
ccaggacagaggacggcagatgatttggagataatttatgaggagctgctccatataaaa
gccttatcgcacctatccaccactgtaaagaaggagttagccggagtcctgatctttgag
tcccatgccaaagcaggaaccgtgttgttcaatcaaggggaggaaggcacatcgtggtac
atcattctaaagggctctgtaaacgttgtcatttatggaaaggggattgtttgcacgctg
catgagggagatgactttgggaagcttgccctggtcaacgatgccccccgcgccgcctcc
attgtcctacgagacgataactgccacttcctacgtgtggacaaggaggacttcaatcgg
atcctcaaagatgtggaggccaacacggtgcgtttgaaagagcattatcaggatgttctg
gtcctggagaagagccccagcagccaggcctccacccatggctccaccaccaccacagcc
acctcctcacactataaatacactgtgatgtccgggacaccggagaagattctggagcac
tttctggaaatgatgcgactggactctcaccttaacgaatcagatccagctctggacgac
tttgtgctcatgcactgcgtcttcatccctaacagtcagctgtgtccggtgctcatggcc
cactaccatgctgaggcgtcccagggctcagaacaggagcgtcttgactataccctgaac
aacaagaggagggtgatcaggctggtgctgcagtgggcctcagtacatggagaccacctg
caggaggaggatgcctccctcgccttcctagaggagttctttgtgtctgtatctgatgat
gccagggtgattcctgctctgaaagatcaactcccagagttagagaagatcgttaaaaac
aactcagatgacgccagatcctctcaacaaaagcacaaaatcctgttgaggcagttcagc
atgggggatgagaagctgcagaaacgacaggccatcaagagtaatgatgagatcctgttc
aaagtgtactgcagcgaccacacctacaccaccatccgggtccccatggccgcctcggtc
agcgaggtcatcagcgcggtggccgacaagctggggtcagcggaggaccttctcctggtc
aacctcagttcggccggagataaagtggtgctaaaacccaacgatatttccgttttctcc
acactcagcatcaacggccgtctatttgtctgtcccggggatcaactggattcattgatg
cccttaccagagcaggaaggaccctccacaggctccctgggcagctttgagttgatgagc
tctaaagacctggcctaccagatgactctctacgactgggaactcttccactgtgtacat
gagcatgagctgatctactatacatttgggaggaagaacttcaagaagactactgccaac
atggacctgttcctcaggaggttcaatgagattcagctgtgggtgatcacggagatctgt
ctgtgtgctcagctcagcaagcgtgttcagctgctcaagaagttcctcaagatcgctgcc
cactgtaaggagtataagaacctcaactccttcttcgctattatcatgggcatgagtaac
ccagccgtgagcagactgagtcaaacatgggagaaactacccagcaaatttaagaagttt
tacagcgaatttgaaagcttaatggacccgtccaggaaccaccgggcgtaccggctcact
gtggccaagctggacccgcccatcattcccttcatgccgctgctgatcaaagacatgact
ttcactcatgatggaaacaagacgttcattgacagtttggtcaattttgagaaaatgcga
atgatcgctaacacagtgagaatagtgagatactgcagaagtctgccattcagtgcagaa
ccatctcagaccagtaagaaccacctggacgtgaggagctatgtgcgccagctgactgtg
attgacaaccagagaaccctatctcagttctcccacagactggaaccacgcaggacctga
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