Oncorhynchus nerka (sockeye salmon): 115109478
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Entry
115109478 CDS
T07952
Name
(RefSeq) beta-1,4-N-acetylgalactosaminyltransferase 3-like
KO
K09656
beta-1,4-N-acetylgalactosaminyltransferase 3 [EC:
2.4.1.244
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00513
Various types of N-glycan biosynthesis
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
115109478
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115109478
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.244 N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase
115109478
Glycosyltransferases [BR:
one01003
]
Glycan extension
Wide specificity
115109478
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
PA14
Cystatin
Motif
Other DBs
NCBI-GeneID:
115109478
NCBI-ProteinID:
XP_029490261
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All DBs
Position
LG25:24724829..24754146
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AA seq
1138 aa
AA seq
DB search
MFKSVFPLKKLRRSRKHLLFLALLMLGAFAVYQEFVATSVWRITNSRFSPTSEGSPRRRP
TQERVVGGDVGEDYSEAWCSSYTPQPWRPEYKGQVNLHIFEDWCGSSTAQLRTNLHYPLY
PHSRTTVKKLAVSPRWTNYGLRIFGYLHPYTDGEFVFAVSSDDNSEFWLSRDDSPLNLQL
LTWIGKTGMEWTAPGEFGKYASQTSRPVRLSVQRMYFFEIVHKQNDRGTDHMEVAWQLNQ
EGLSFTVISSKYISLYTNESTLRMSDTTHIPQTAASHTHTPSNQPDNQLSSQPVADMRRV
DPRDTLYQIPALDSRYLRGVLPDCSYKPSYIIKGFPLLRYQGLQFVHMSYIYPNDYTRLT
QMETENTCFYHNSPLDLDRYGFSRYMRLDEPEGQEGENRDIGILMRRKAVPEEGLDGEAP
PNVGGASETDHTPPDYGDDYDDYAKRRRRKLFSLPQADRAPTHRNMSDTLTYKKRRRKKR
RGSNAAAVVQTRATELDGLEIPHGPGSHKPIQTTPEEKLRPADRPADRPVEQLRPAQKKK
SRTGEQKPGGNPADREDLGPADREDLGPADREDLGPADQNQPRPREGPAEQNSTGLKILP
SPQKLDQNMPTDRDRPAKRYRPAERDRPADREKLADRPAGGPADRDGLADRSADRDRPQV
RLPQLQGRRRRIQQPGQRGGTKIKSPLVKLYHKATVTRKRVQDLDTDIILRAQTHIKSRP
QPDYDNTVHRALPPGEVRGRNHLVEGIDRGEEGERKGEEMGVSESLWSLGGDSEEEEGLA
YDSTPPPVFDPEVNWAQTFQVTPVNLQAMRSDWIDLSCNVSGNLLLRPSDALPVVKAFMD
KLNHRHNRHFSLVRVLNVERKVDGVQGSRYFLELELRDMTGQHLRLSHYIYALIRHNRSR
PRGVLRRAPETLLCKPLGFHWNPTATVHFIVPVKNQARWVQQLIVDMEGLYQNTGDPYFN
LIITDYNSTDMDIEAALKASTLHRYQYVKLSGNFERSAGLQAGIDLINDEHSIAFLCDLH
IHFPPSIVDSVRKHCVEGHMAFAPIVMRLDCGATPKEPRGYWEVNGFGLLGIYKSDLDAA
GGMNTHDFTDRWGGEDWELLDRILQSGLEVERIYLRNFLHHYHSKRGMWNRRTQRSGT
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaatcggtcttcccgctgaagaagctgagacggagtcggaaacatctgctgttc
ttagccctgctgatgctgggagctttcgctgtttaccaggagtttgtagctactagtgtg
tggaggatcaccaatagccgtttcagtcctaccagtgagggcagtcccaggagaagacct
acccaagaaagagtggttggaggtgatgtgggggaggattattcagaagcctggtgttcc
agctacaccccacagccctggaggccagagtataagggacaggttaatctccatatcttt
gaggactggtgtggcagctctacagctcagctccgcacgaacctgcactacccactctac
ccacactctagaaccactgtaaagaagctggctgtttctcctagatggaccaactatggc
ctcaggatctttggctatctccacccctatactgacggtgagtttgtgtttgcggtgagc
tctgatgataactctgagttctggctgagccgggatgactctccactcaacctgcagcta
ctgacctggatcggcaagactggcatggagtggacggcacctggtgagtttgggaagtac
gccagtcagacatccagaccggttaggctgtcagttcagaggatgtacttctttgagatc
gtccataaacagaacgacagaggaacagaccacatggaggtggcgtggcagctgaaccag
gagggtctaagctttacagtcatcagctccaagtacatatccctctataccaatgagtcc
actctgaggatgagtgacaccactcacataccccaaacggccgccagtcacacccacacg
cctagcaaccagcctgacaaccagctgagcagccagcctgtggccgacatgcggagagtt
gacccacgggacaccctctaccagatccctgccctagacagtaggtacctccgtggtgtg
ttacctgactgctcctataaaccaagctacatcatcaaaggcttccctctgctgcgatac
cagggtctgcagtttgtccacatgtcctacatctaccccaatgactacacacggctcaca
cagatggagacagaaaacacctgcttctaccacaacagtcccctagacctggacaggtat
ggcttttccaggtacatgcggctggatgagccagaggggcaggagggagagaacagagat
attggcatcttgatgaggagaaaggcggtcccagaggaggggttagatggcgaggcgcct
ccaaatgtgggaggggctagtgagacagaccacacccctcctgactatggggacgactat
gacgattacgccaagagacgacgacgcaaactcttctccctgccacaggccgacagggca
cctacacatagaaacatgtctgatactctcacatacaagaagaggaggaggaagaagagg
agaggatctaatgcagcagctgtagtccagaccagagcaacagaactggatgggttagag
atccctcatggtcctgggtcacataaacctatacagactacaccagaagaaaagctgaga
ccagcagacagaccagcagatagaccagttgaacagctcagaccagcacaaaaaaaaaag
tcccgaacaggggaacagaaaccaggagggaatccagcagacagagaagatctgggtcca
gcagacagagaagatctgggtccagcagacagagaagatctgggtccagcagaccaaaat
caacccagaccaagagagggaccagcagaacagaactcaactgggttaaagattttacct
tcaccacaaaaactagaccagaacatgccaacagacagagacagaccagcaaagagatac
agaccagcagagagagacagaccagcagacagagaaaagctagcagacagaccagcaggc
ggaccagcagacagagacggtctagcagacagatcagcagacagagacagaccacaagtt
cggctaccccagctgcaagggaggcgccggcgcattcaacagcctggtcagaggggtggg
actaagattaaatcacctctagtgaagttgtaccacaaagcaactgtgactaggaagaga
gtccaggacctagatacagatatcatcctccgagcacaaacacatataaagtcacgaccg
caacctgactatgacaacacagtccacagggctctgccccctggcgaggtcagaggaagg
aaccatctggttgaagggattgacagaggggaggagggtgagagaaagggggaggagatg
ggtgtgagtgagtctttatggagtctggggggagactctgaagaggaggaggggctggct
tatgactccacacctccaccggtgtttgaccctgaggtgaactgggctcagacattccag
gtgacccctgttaacctccaggcgatgcgttctgattggatagacctaagctgtaacgtt
tctggtaacctgctgctccgccctagtgatgctctgcctgtcgtcaaggccttcatggac
aaactaaaccacagacacaacaggcatttctccctggtgcgtgtgctgaatgttgagagg
aaagtggatggggttcagggcagcaggtacttcctggagctggagctaagggacatgact
ggccaacaccttcgtctgtcacactacatctatgctctgattcgccataatcgatctcgc
cccaggggagtccttcgccgtgcccctgagacgttgctatgcaagcctctaggcttccac
tggaacccgactgccactgtacacttcatagtaccagtaaagaaccaggcccgctgggtg
cagcagctgatagttgacatggagggtctgtaccagaacactggagatccctacttcaac
ctcatcatcactgactacaacagcactgacatggatatagaggcagcactaaaggcatcc
acgctgcacaggtaccagtacgtgaagctgagtggaaactttgagcgttccgctggtcta
caggctggcatcgacctcatcaatgatgagcacagtatagcgtttctgtgtgaccttcac
atccacttccccccgtccatcgtcgactcagtcaggaaacactgtgtggagggacacatg
gccttcgcccccatcgtcatgagactggactgtggagctacgcccaaggagcccagaggt
tactgggaggtgaatgggtttggtctgctggggatctataagtctgacctggatgcagca
ggaggcatgaacacacacgacttcactgaccgctggggcggagaggactgggagctgctg
gacaggattctgcagtcgggtctggaggtggagcgtatctacctgaggaacttcctgcat
cactaccattctaaacgtggcatgtggaaccggcgcactcaacgcagtggcacgtaa
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