Oncorhynchus nerka (sockeye salmon): 115109554
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Entry
115109554 CDS
T07952
Name
(RefSeq) bile acid receptor-like isoform X1
KO
K08537
farnesoid X receptor
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115109554
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115109554
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115109554
Nuclear receptors [BR:
one03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
115109554
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
115109554
NCBI-ProteinID:
XP_029490420
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Position
LG25:complement(30836813..30862349)
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AA seq
482 aa
AA seq
DB search
MNEWVGPEVNVVGPLQIPHNDGFPLSENSHFFDILADQGSPLLQDQEVLSFTNYPSMQYP
SVEPTMSSPPYYSNQNYYPQYSVEEWYSPTEMYELRKEPLEGSYDVEMEEASAIVPAVCK
RTRHTSHAGRVKGEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKSKGTCE
MDMYMRRKCQECRLRKCKEMGMLAECLLTEIQCKSKRLRKNTKASPGESTWDETEGGDSK
QVTSTTKLSKEKIELSQEQQAILSFIVGAYQKHRIPQDMAKKLLQEHFNADENFLLLTEM
ATSHVQVLVEFTKNIPGFSALDHEDQIALLKGSAVEAMFLRSAQVFTRKLPHGHTEVLED
RIRKSGISEAFITPMFNFYKSIGELQMMPEEHALLTAITILSPDRPYLKDQQAVERLQEP
MLELLRRFCAMQHPLEPQHFARLLGRLTELRTLNHHHAEMLTSWRMSDHKFTPLLCEIWD
VQ
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtgggtgggccccgaagtaaatgtggtgggaccactacagatcccacacaac
gatggattcccattgtccgagaactcacacttctttgatattctggcagatcaagggagc
cctctgctccaggaccaagaggtcttatccttcaccaactatcccagcatgcaatacccc
tcggtggagcccaccatgtcctcccctccatactactccaatcagaattactacccccaa
tacagcgttgaggagtggtactcacccacagagatgtatgaactgaggaaagaacccctg
gagggtagctacgatgttgaaatggaagaggcatccgccatagtgcctgcggtgtgcaag
aggaccaggcacacttcccacgcaggcagggtcaaaggggaggagctgtgtgtggtgtgt
ggggacaaggcatctgggtaccactataacgctctcacctgtgagggatgtaaaggcttc
ttcagacggagcatcacaaagaacgccgtgtacaagtgcaagagtaaagggacctgtgag
atggacatgtacatgcgcaggaagtgccaggagtgtcgtctccggaagtgcaaggagatg
ggcatgctggcagaatgtctgctgacagagatccagtgtaagtctaaaaggctgaggaaa
aacaccaaggcctcaccaggagagtccacttgggacgagacagagggtggagacagcaag
caggtcacttccaccaccaaactgtcaaaggagaagattgagctcagtcaagagcagcag
gctattttgagcttcatcgtaggagcttaccagaaacatcgaatccctcaagacatggcc
aaaaaactgctacaggagcatttcaatgcagatgagaacttcctccttttgacagagatg
gccaccagtcatgttcaagtgctggtggagtttaccaaaaacattccaggtttctctgcc
ctggaccatgaggatcagatagctctgttaaagggctcggcagtggaggccatgttcctg
cgctcagcacaggtgtttaccaggaagctaccccatggacacacagaggtgctggaggac
aggatacgcaagagtggaatatcagaggcgttcattacacccatgttcaacttctacaaa
agcatcggggaactccagatgatgccggaagaacacgcccttctcaccgccattaccatc
ctgtcaccagaccggccatacctgaaagaccagcaggcagtggagaggctgcaggagcct
atgctggagttgctcaggaggttctgtgcaatgcagcacccgctggagccccagcacttt
gcccgtctcctgggacggctgaccgaactgcgaaccctcaatcaccaccacgccgagatg
cttacctcttggcgcatgagcgaccacaagttcacccccctcctctgtgagatctgggac
gtacagtga
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