Oncorhynchus nerka (sockeye salmon): 115109800
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Entry
115109800 CDS
T07952
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1-like
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04260
Cardiac muscle contraction
one04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115109800
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115109800
04261 Adrenergic signaling in cardiomyocytes
115109800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115109800
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115109800
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Ortholog
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GFIT
Motif
Pfam:
VGCC_alpha2
dCache_1
VWA
VWA_N
VWA_2
Cache_3-Cache_2
MCP-like_PDC_1
Motif
Other DBs
NCBI-GeneID:
115109800
NCBI-ProteinID:
XP_029490936
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Position
LG25:23840407..23961553
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AA seq
1000 aa
AA seq
DB search
MNSIGQWLLVEEDEKEEKGYELRYRVPFISFVLLIKEWVDQIQIELVTLADTASARKSLT
QIFLDNQNLIKEWVDQIQIELVTLADTASARKSLTQIFLDNQNLYTVESNDAEELVARAA
RNIEQLLLKRAGALETLATAAENFQMEHQWEDEYALEVNHTEGRKNRIRPAFKEDPLFKR
FTSDNDTAVHIPTDIYDGSVGPIGLCRFQSTDDLANKFNTRVKNTACFDHLVQANVRNKK
ILKDAIQNISAKGITNYTKGFEFAFEQLYATITRANKIIMLFTDGGEERASAILQEHNSD
KKVRIFTFSVGQHNYDQGPVQWMACANKGYFYEIPSIGAIRINTQEYLDVLGRPMVLADQ
LAKQVQWTNVYLDALELGLVITGTLPVFNKTKYKDELGIENQLILGVMGIDVSLDDIKKL
TPRYTIGPNGYYFAIDPNGYVLLHPNLQPKNPKLQEPVTLDFLDAELENDVKVQIRRIMI
DGNPGEETIETLVKTQDERYIDRGVRTYTWAQVNGTDYSLALVLPMYSEHYIQAKLGDTI
RPSGYGDTLQVERFDELGHTFIAPREYCKGLKDKDNNTQFLLDFNQFIDRNTLSSPMCNM
ALVSRLLLDAGLTADLVKLWKEQTLHGVLARFVATDGGITRVYPRSAGEEWTENAETYDS
SFYKRTLDDDIYIFTAPYFNKSRESGYESGILVSKAVDLNIDRVNLKPAVVGVKLNVSAW
MNSFMNATIKVNCKDEICGCLKNDKHVDCVILDDGGFLLMSNQDEYITQVNRFFGEVDPV
VMISLVNTSLYSFNKTYDYQSVCNPERDCKAAAGPRSVYVPTIADMLSIGWWASTGAWSI
MQQLFYSLIFPRFLEAVDSDDDMSANMFKESCITEQTQYFFDNEERSYLGVLDCGNCSRM
YRAEKLSNTNLVFLITDAKTTCLSCDPRPLRQAEQPSQGPDRCELAQNPRYRKGPDVCFD
NNVDKDDSDCGGGTSLSPSAWPMLGLQLLLLWLLTGPRHS
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtattggtcagtggttgctcgtagaggaggacgaaaaagaggaaaagggatat
gagttgcgttacagagtgcccttcatctcctttgtgttattgataaaggaatgggtggat
cagatacagatagagctggtgacactggcagacaccgccagtgccaggaagagcctcaca
cagatcttcctggacaaccagaacctgataaaggaatgggtggatcagatacagatagag
ctggtgacactggcagacaccgccagtgccaggaagagcctcacacagatcttcctggac
aaccagaacctgtacacagtagagtctaacgatgcagaggaactagtggctagggcagcc
aggaacatagaacagctgttattgaagagggctggcgctctggaaactctggccacggct
gctgagaactttcagatggaacaccagtgggaggatgagtatgcgttggaggtgaatcat
acagagggtaggaagaaccggatcaggccagcctttaaggaggacccgttgtttaaacgc
ttcacctctgataacgacactgctgtacacatccctactgacatctacgatggctctgta
ggtccaataggtctgtgcaggtttcagagcactgatgacttggctaacaagttcaacacc
agagtgaagaacacagcgtgttttgaccacctggtccaggccaacgtgaggaataagaag
atcctgaaggatgcgattcagaacatctctgctaaaggcatcaccaactacaccaaggga
tttgagtttgcctttgaacaactctatgcaactatcactagagccaacaagatcatcatg
ctgttcactgacggaggagaggagagagcatcggccatacttcaggaacacaactctgac
aagaaggtgcgtatcttcaccttctcagtaggtcagcacaactatgatcaaggtccagtc
cagtggatggcctgcgctaataaaggatacttctatgagattccctcaattggagccata
cgcatcaacactcaagagtacctggatgtactgggcagacccatggttttagctgaccag
ctggccaagcaggtccagtggactaatgtctacctcgacgctctggagctaggtctggtc
atcacaggaaccctacctgtcttcaacaagaccaagtataaagatgaattgggcatagag
aaccagttgatcctaggggtgatggggattgacgtgtcactagatgacatcaagaagctc
acaccgcgttacactatcggacctaatggatattattttgccatcgaccccaacggatat
gtgctgctacaccccaacctccaacctaagaaccctaaattacaggagcctgtcactctg
gacttcctcgatgcggaactggagaacgacgttaaagtccagatcaggagaattatgata
gatgggaacccaggtgaagagaccatagagactctggttaaaactcaggatgagagatac
atcgacagaggagtaaggacgtacacctgggctcaggtcaatggaacagactatagcttg
gccctagtcctgccaatgtacagtgaacactacatacaggccaaactgggagacaccatc
agaccatcaggctatggggacactctgcaggtggagaggtttgatgagttgggacatacc
ttcattgcccccagggagtattgcaaaggcctgaaggacaaggacaacaacacccagttc
ctcctggacttcaaccagttcattgacaggaacacactatcttctcctatgtgtaatatg
gctctggtcagtaggctgctgttggatgctgggttgacggctgatctggtcaaactgtgg
aaggagcagacattgcacggagtcctggccaggtttgtagccactgacggagggatcact
agagtctatcccagaagtgctggggaggagtggacagagaatgccgagacctatgactca
agtttctacaagaggactctggatgacgacatctatattttcactgctccatatttcaac
aagagcagggagtcaggctatgagtcaggtattctggtgagcaaggctgtagacctcaac
atagacagagtcaacctcaaaccagcggtggtgggagtgaaactaaacgtctctgcctgg
atgaacagcttcatgaacgccaccatcaaagtcaactgcaaggatgaaatctgtggctgt
ctgaagaatgataagcatgttgactgtgtcatcttggatgatggaggctttctgctgatg
tccaatcaggatgagtatatcacacaggtgaatcggttctttggggaggtggacccagtc
gtgatgatcagtctggtcaacacatctctgtactccttcaacaagacctatgactaccag
tcagtctgcaaccctgagagagactgcaaggctgctgcagggccacgatctgtctacgtg
cccactatagcagacatgctgagtataggctggtgggcctccacaggtgcctggtcgata
atgcagcagctcttctacagtctcatattcccaaggttcctagaggcagtggactcagat
gatgacatgtctgctaacatgtttaaggagagttgtatcacagagcagactcagtatttc
tttgacaacgaagagagatcctacttgggagtcctcgactgtggaaactgctccaggatg
tatcgagctgagaagctgtccaacactaacctggtgtttctgatcactgatgccaagacc
acctgtctgtcctgtgaccccagaccactacgacaggcagagcaaccatcccaaggtcca
gatcgctgtgagctagctcagaaccccaggtacaggaaaggacctgacgtgtgtttcgac
aacaacgtagacaaggatgattctgactgtgggggcgggacctctctaagcccctccgct
tggcccatgttgggactccaactactgctgctgtggctcctcactggcccccgacactca
tga
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