Oncorhynchus nerka (sockeye salmon): 115110645
Help
Entry
115110645 CDS
T07952
Name
(RefSeq) sphingosine kinase 1-like
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00600
Sphingolipid metabolism
one01100
Metabolic pathways
one04020
Calcium signaling pathway
one04148
Efferocytosis
one04370
VEGF signaling pathway
one04371
Apelin signaling pathway
Module
one_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
115110645
09130 Environmental Information Processing
09132 Signal transduction
04370 VEGF signaling pathway
115110645
04371 Apelin signaling pathway
115110645
04020 Calcium signaling pathway
115110645
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115110645
Enzymes [BR:
one01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
115110645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAGK_cat
YegS_C
Motif
Other DBs
NCBI-GeneID:
115110645
NCBI-ProteinID:
XP_029492329
LinkDB
All DBs
Position
LG26:complement(21172562..21189201)
Genome browser
AA seq
552 aa
AA seq
DB search
MDNDMAETDPSRQRNGVVEGLYGEFTDSLNSKVRYSVSLTESALTIQKISSSLEQDEVVF
HLADCLGCRAYKVEDEADVGAFFTAYFYPFKRRWISTGMARQKVEQCFRVALVQDPLTNL
QEAERWARAIREASIRQIPRRHDVKYYEVRRPCRVMVLVNPQSGRGQALQLFSGQIEPML
TEASVPYTLVITEHQNHARDLVRETDLSQWDALVILSGDGLLFEVLNGLLEREDWEEAIQ
TPLGILPGGSGNALAASVHHYTKSPPVWGKELLLSCGFLLCKGLVTRLDLVSVHLASSQR
IFSFLSLAWGFVADVDIESEKYRLVGPMRFLVGTLMRLASLKVYQGRLAYLPAPPFTPQN
SSLCSSLPCGPNSSPNQNSRHNHITNSNHSTNSNHNTAHNSSNIPITTMRTEPQPVNQKG
PPDSLLADLEQPVPDHWTVVNEEDFVLVLAMFQSHLAEDLFAAPGAAADDGFIHLLYVRA
GISRLALLTLFMTMEKGGHLAIGCPHLVYERVKAFRLEPLSPEGAITVDGEMVEYGPVQA
QVHEGIARLISG
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggataacgacatggccgaaacggacccatcccgtcagcgcaatggtgtcgtggaaggg
ctttatggagaattcacggactcgctcaattcaaaggtcagatattctgtgagcttgact
gagagtgctctcactatacaaaagatatcatcgtcacttgaacaggatgaggtggttttc
catttagctgactgtcttggctgccgggcttataaagtggaggacgaagcggacgttggg
gcgttctttacagcctatttctacccgttcaagaggcgatggataagcacaggcatggcc
cggcagaaagtagagcagtgctttcgggtcgcactggtccaggaccctctcactaatctt
caagaggcagagagatgggcgcgtgccatcagagaggcttctatccgccagataccccga
cgacatgatgtgaagtactatgaggtacggcggccctgcagggtcatggttctggtgaac
ccccagagtgggcggggccaggctctccagcttttctccgggcaaatcgagcccatgctc
accgaggcttcagtcccttacacattggtcatcactgagcaccagaaccatgcgagggac
ctggtgagagagactgatctgtcacagtgggacgctctggtcatcctgtcaggggacggc
ctgctgttcgaggtgttgaatggtcttctggagagagaggactgggaggaggccatccag
accccactgggcatcttaccagggggctcgggcaacgccctggcagcctctgtccaccac
tacactaagtctcccccggtctggggtaaggagctgctgctgagctgtggcttcctgctg
tgtaaaggcctggtgactcggctcgacctggtctctgtccacctggcctccagccagcgc
atcttctccttcctctccctggcctggggcttcgtggctgacgtcgacatcgagagcgag
aagtaccgcctcgttggccccatgcgattcctggttggtacgctgatgcgcctggcctcc
ctcaaggtatatcagggtaggctggcatacctgcctgctcctcccttcacaccccagaac
tcctccctctgctcctctctaccctgtgggcccaacagctcccccaatcagaactctcgc
cacaaccacatcacaaactccaaccacagcacaaactccaaccacaacaccgcccacaac
tcctccaacattcccatcacaaccatgaggaccgagccccaaccagtcaaccagaagggg
cctcctgactcgctcctagcagacctggagcagccggtgcctgatcattggacagtagtg
aatgaggaagactttgtactggtattggccatgttccagtcccacttggctgaggacctg
tttgccgcccctggggccgcagcagacgacggcttcatccacctgttgtatgtgcgtgca
ggcatctccaggctagctctgctcacactcttcatgaccatggagaagggggggcacctg
gctattggctgcccacaccttgtgtatgagagggtgaaggcctttcgcctggagcctctg
tcccccgagggagcgatcactgtggacggggagatggtggagtacgggccagtacaggcc
caggttcatgaaggaatcgccaggctcatctcaggctga
DBGET
integrated database retrieval system