Oncorhynchus nerka (sockeye salmon): 115111300
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Entry
115111300 CDS
T07952
Name
(RefSeq) ras GTPase-activating protein 1-like isoform X1
KO
K04352
Ras GTPase-activating protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115111300
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115111300
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Gene cluster
GFIT
Motif
Pfam:
SH2
RasGAP
PH
C2
SH3_1
SH3_9
SH2_2
PH_11
PH_RASGAP
Motif
Other DBs
NCBI-GeneID:
115111300
NCBI-ProteinID:
XP_029493074
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Position
LG27:5695591..5735352
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AA seq
1080 aa
AA seq
DB search
MIAAEASSEDTGSVSTGVAGGGGPETAHFPFYPNQTRVRVTDFGQRSAPNSRYQSNTTPD
ALPDMSMIYPVSGGDITGPVLSATGNGGGGHANCQGTSSGTIGGVCYSPTSEGPGSRISP
TSSGPDGPSVFPPLPPPPLLPTGYGGLGTVDESEMQDGPEYEEEEVVFPLSAPPTNQWYH
GKLDRTIAEERLRQAKTPGSYLIRESDRRPGSFVLSFLSLTSVVNHFRIIAMCGDYYIGG
RRFSSLSDLIGYYSYVSCLLKGEKLLSPVAPPEPVEDRRRVRAILPYTKVPETDEISFLK
GDMFIVHNELDDGWMWVTNVRTEEQGLIVEDLVEEVGREEDPHEGKVWYHGKIRKQEAYN
LLMTVGQVCSFLVRPSDNTPGDYSLFFRTNENIQRFKICPTPNNQYMMGGRYYNSVDDVV
DHYKKEQIVEGYNLKDAVSVQHQEQVLSELVDGKEIYNTIRRKTKDAFYKNIVKKGYLLF
NKGKGKRWKNLYFILEGNDAQLIYFESEKRATKPKGLIDLSVCSVYGVHDSLFGRPNCFQ
VVVQHFSEEQYIFYFAGETPEQAQDWMKCLHTFCSNLRKPTQPTPNKRLRQVSSLVLYVE
EAHKLPVKHFTNPYCNIYLNNVQVAKTHPREGQNPVFTEEFIFDDLSSEINRFEISLSNK
TKKSKESDILFMRCQLSRLQKGQMIDEWFPLSSHVPLKGIEPGSLRVRARYSMEKIMPEE
EYSEFKELILLKEFHVIYALAHVCGQDRTLLASILLRIFRHEKTEAPLLRTLNDREINME
DEATTLFRATTLASTLMEQYMKATATPFVHHALKDTILKIMESKQSCELNPSKLEKNEDV
HLNLAHLLLILSELVEKIFMAAEILPPVNRLSSVIDDDVPIDDGCQSLSTPDDIIHRPNP
NKTLRYIYGCLQKSVQQKWPNTTMRTRVVSGFVFLRLICPAILNPRMFNIITDPPSATAG
RTLTLVAKSVQNLANLVEFGAKEPYMEGVNPFIKNNKHRMIMFLDELGNVPDLPEATEHF
RTDLSRDLAALHEICVSHSDDLRTLSNERGAQQHVLKKLLAITELLQQKQDQYAMSNSNR
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgatagctgcggaggccagtagtgaagacacgggctctgtctcgacaggggtggcaggc
ggcggaggccccgagacggcccattttccgttttatcccaatcagaccagagtgcgggtc
actgattttggccagcgatcagcaccaaactcccgctaccagtcgaacaccaccccggac
gccctccctgatatgagtatgatttaccccgtatctggaggagatattaccggaccagtc
ttgtccgctacagggaatggtggtggtggacacgcaaattgtcaaggaacaagctcaggg
accattggcggtgtgtgctactcccccacctcagaggggcccggcagccggatatcaccc
acctcgtcgggtccagacgggcccagtgtcttccccccactaccaccaccacctctgctg
cccacaggctacgggggactcggcactgtggatgaaagcgagatgcaggatggaccagaa
tacgaggaagaggaggtggtcttcccgctctcagcgccgcccactaaccagtggtaccat
gggaagctggaccggaccattgctgaggagcggttgcggcaggccaagactcctggcagc
tacctcatcagggagagtgaccgccgtcccggctcctttgtcctgtccttcctcagcttg
accagcgtggtcaaccatttcaggataatcgccatgtgtggagactattacattggcggg
cgccggttctcgtccctgtcggacctgattggttattacagctatgtgtcttgcctgctg
aaaggtgaaaagctgctatcacccgtggctcccccagagcctgtagaggacaggaggcga
gtgagagccattcttccatacaccaaagtgccagagaccgatgagatcagcttcctgaaa
ggggacatgtttatcgttcacaatgaactggatgacggctggatgtgggtgaccaacgtg
aggacagaggagcagggcctcattgtagaggatctagtggaggaggtgggacgggaggag
gacccacatgagggcaaagtctggtatcacggcaagatccgcaaacaggaggcctataac
cttctgatgacagttggtcaagtgtgcagcttcctggtccggccgtcagacaacacaccc
ggggattactcactgttttttcgcactaatgagaacatccaaaggtttaagatatgcccc
acccccaacaatcagtacatgatgggggggaggtactataacagtgttgatgacgttgtg
gaccattataagaaggagcagattgtagagggctacaacctgaaagatgctgtttcggtg
cagcaccaggaacaagtgctctcagagttggtggacggcaaggagatctataacactatc
agacggaaaacgaaagatgcgttctacaaaaacattgtcaagaaaggctacctcctattc
aacaaaggcaaaggtaagcggtggaagaacctctacttcatcctggaggggaacgacgcc
cagctcatctactttgagagtgagaagagagccaccaaacccaaaggtctgattgacctg
agtgtgtgttccgtgtacggtgtgcacgacagtctgtttggcagaccaaactgtttccaa
gttgtggtccagcactttagtgaggaacagtacatattctacttcgctggcgagactcct
gaacaggcacaggactggatgaaatgtctgcacacgttctgcagtaaccttaggaaaccc
acccagcccactcccaacaagaggctccgacaggtgagcagcctggtcctgtatgtggag
gaggcccacaagctgcctgtgaagcacttcaccaacccctactgcaacatctacctgaac
aatgtgcaggtggccaagacccacccccgagagggtcagaaccccgtattcacagaagag
ttcatctttgatgacttgtcgagtgaaatcaacaggtttgaaatcagcctgagcaataag
acaaagaagagcaaagaaagtgacatcttgttcatgcgttgccagctgagccgcctacag
aagggccagatgatagacgagtggttccctctgagctcccacgtgcctctgaagggcatc
gagccgggctctctgagggtccgagcccgctactccatggagaaaatcatgcctgaggag
gagtacagtgagttcaaagagctgatcctgctgaaggagttccatgtgatctatgctctg
gcccatgtgtgtgggcaggaccgcaccctgctggccagcatcctgctgcgcatcttcaga
cacgagaagacagaggcccccttactcaggacactcaatgacagagagatcaacatggag
gacgaggcgacaaccctgttccgagcgaccactctggccagcacgctgatggagcagtac
atgaaggccacggccacacccttcgtccaccacgccctcaaagatacaatcctcaagatc
atggagagcaagcagtcctgcgagctgaacccctccaaactggagaagaacgaggatgtg
catctgaacctggcccacctcctcctaatcctgtctgagctggtggagaagatcttcatg
gcggctgagatcctgccccctgtaaataggctttcatctgtcatcgacgatgacgtcccc
atcgatgatggctgtcaatcattgtcgacacccgatgacatcattcatcggcccaaccct
aataaaactctacgatatatctatgggtgtctacagaagtcagtgcagcagaaatggccc
aacaccactatgagaacccgggtggtcagtggctttgtgttcctgagactgatctgtcct
gccatcctcaacccaagaatgttcaacatcatcactgaccctccctctgcaacagcggga
cgtaccctcactctggttgccaagtctgtccagaacctggctaacctggtagagtttggt
gctaaggagccctacatggagggagtgaaccccttcatcaaaaacaacaaacataggatg
atcatgtttttggatgagttgggtaatgtccctgacctccctgaagctacagagcacttt
aggacagacctgtcccgtgaccttgctgccctgcatgagatctgtgtctcacactcagac
gacctccgcaccttgagcaacgagaggggagcacagcagcacgtgctgaaaaaactgctg
gccatcactgagctccttcagcagaaacaagatcaatatgccatgtccaacagcaacagg
tag
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