KEGG   Oncorhynchus nerka (sockeye salmon): 115111822
Entry
115111822         CDS       T07952                                 
Symbol
ercc6l2
Name
(RefSeq) DNA excision repair protein ERCC-6-like 2
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:one03400]
    115111822 (ercc6l2)
DNA repair and recombination proteins [BR:one03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    115111822 (ercc6l2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 VIGSSK ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 115111822
NCBI-ProteinID: XP_029494148
LinkDB
Position
LG27:complement(28273686..28290425)
AA seq 1580 aa
MMASTSTADIKVWHEGDRCLAPSLRDGTLLREGTIQKLPSTSHGEDMALVKFTDQHDEDE
EEEAVFPVCKLQRPDTNQSSTSVVSAQEKPLFLCSQTPPGPSEPLVLSPSGVAVPYTINR
YLRYYQKEGIQFIYDNYAQSRGCILGDDMGLGKTIQVIGFLAAVLGKTGTWEDIENNRPQ
FLLTQIPTQRSKPRKVFLIVAPLSVLYNWKEELETWGHFLTVVVHGLRKEEELARIRRGR
SEIALTTYETLRLYLEQFNSIDWSAVIVDEAHKIKNPNSQITGAMKDLRCPVRVGLTGTI
LQNNLDELWCVMDWAIPRCLGSLGNFKNMFSDPIELGQKHSVTKRALATGRRAVRALASK
LSHWFLRRTKALIREQLPKKDDRVVYCSLTSFQQTVYQAVLDTEDVTLLLRSSEKCDCHS
GHSRRKCCYKVNARGVRVTDLYFSYLAILRKVANHVALLQAKWNTSKKQEQYVNEICETV
FQKFPDFTEKCKQAAFEAMSDPMYSGKMKVLQRLLKHYMQRKDKVLLFSLSTKLLDVLES
YCMADGLEYSRLDGNTKPRERLKIVKEFNSCPDINLCLVSTMAGGLGLNFVGANIVVLFD
PTWNPANDLQAIDRAYRIGQCRDVTVFRLISLGTVEEVIYLRQVYKQQLQSSVMGKESAR
RYFDAVQGSDDQKGELFGIQNLFRLQTQGTCLTRRILEREGRVEVGVMTSSTHTGEEEER
KSESEAGEVSARDHCELGNGGAIGSVGASRIPRATTRGVLDFSSGSEEEGEQGDRSKVEK
ANTTLPGRLSLLQHGFSRLLQRSGVRAGSGSESGEHSQSEGGRSDSEEDSDEDTSAMAPK
GLSTAGSGGPQTPTLAPKCGNHLDAAPLKNDWDVSSGSEREEERNGGRWDGQRGRDHDPV
TLSGESDDMGRKIQNRKQGIRRKRRVEEDSDDDSPPSSGSKRSNTKTPVSRMHQVMFDSE
SEDIDIEELIKPCAQTHVLKRPPAHLRRREMGRDGGSKRETSNRPVDQSRRTRQAEDIET
FTSSDENHTAVERVRSVTAPQNHNHGRGPQTDQHGARAFTNPKVNQTVPSAKGPPCGTID
NVLGGVREVVYTHSNQHVVGGSKAEERISRAALRDVFERRRFSQLPANELRDTQKTQPEH
TPPFYTSHNNDVGWVGAVHRPSVDHPVTHTIRSVHHPTQHTTVIIGETPGTIRRQQLEEM
ACVFGSVSLRQFAEEVLRSTSAQRLAQLRQYYTDQGPEVASTIRENFAEPHTAQPKVNRT
TPSSSTTKHRPNSKRNQRVALEPQAEPRTRHRSVPEPQRDVPSSEEQMVRNARGGKKKSG
NSGMSRAAQCSSSDLDNSRSSPLGPGASRAQPVSSSSSSSSALSHPQAKPTASPQRGRSS
LLSSPRKSEVVGRQRYRAQPSSPPSQQVLLTELLGDTSILDDLLRPRSKASSEPSRAFPK
TPTSRAVFTPTSHSATPASCHPTTPPKPPSTPHPRPLTKSVPGPSSTTTTPPSRSITTPL
THPITPLFSPAPERSKNSHRDFWDILEEGNEERINKLTDPSEVERVCESASVRARGGTGG
GEEKGNTSLWKRNDKFLWKK
NT seq 4743 nt   +upstreamnt  +downstreamnt
atgatggcttcaacttccacagctgacataaaagtgtggcatgagggcgacagatgcctc
gctcccagcctcagagatggcaccctactacgagaggggacaatccagaaactcccttcc
acttctcatggtgaggacatggcactggtgaagttcacagatcaacatgatgaagatgaa
gaagaggaggcagtctttccagtctgtaaactccagagaccagacacaaaccagtcgtcc
accagtgtagtgtctgcccaggagaagcctctattcctctgcagccagacacctcccggg
ccatcagagcccttggtgttgtcaccgagtggtgtggcagtcccatacaccatcaacagg
tacctgaggtactaccagaaggaagggatccagttcatctatgacaactatgcccagtcc
agaggatgtatcctgggagatgacatgggcctgggcaagaccattcaggtcattggtttc
ctggctgctgtgctgggtaaaacagggacatgggaagacattgagaacaacaggcctcag
tttcttctcactcagatccccacacagcgaagcaaaccccgaaaggtgttcttgattgtg
gcccctctgtcggtgctgtacaactggaaagaggagctggagacgtggggtcacttcctg
accgttgtagtccacggtctgaggaaagaggaggagctggctcgcatccggaggggacgc
tctgagatcgccctcaccacctacgagaccctacgcctctatctggagcagtttaacagc
attgactggtctgctgtgatagtggacgaggcccacaagatcaagaaccccaactcccag
atcactggggcaatgaaggatctgaggtgtccggtcagagtgggcctcactggcacaatc
ctgcagaacaacctggatgagctctggtgtgtcatggactgggccatccctcgttgcctt
ggcagcctgggtaacttcaagaatatgttttcggaccccatcgaactggggcagaagcac
agcgtaactaagcgggccctagcgacgggcaggagggcggtccgggccctggcttcgaag
ctctcccattggtttctccggaggaccaaggctcttatcagagagcagctgcccaaaaaa
gacgacagggtggtgtactgttcgctgacgtcgttccagcagactgtgtaccaggcggta
ctggacacggaggacgtcaccctgctcttgcgctcctcagagaagtgtgactgtcacagt
ggacactcccgcaggaagtgctgctacaaggtgaatgctcggggtgtgcgtgtgacagac
ctgtacttcagttacttggccattctcaggaaggtggccaaccacgtggctttactgcaa
gccaagtggaacaccagcaaaaagcaggagcagtatgtgaatgagatctgtgagacggtg
ttccagaagtttcctgacttcacagagaaatgcaagcaggcagcatttgaggccatgtca
gaccccatgtacagcggaaagatgaaggttctccagaggttgttgaaacattacatgcag
agaaaagacaaagtgctattattttccctctccactaagctgctggacgtgctggagagc
tactgcatggcagatgggctggagtatagcagattggatggcaacaccaagcccagagag
aggctgaagatcgtcaaagagttcaacagctgccctgacatcaacctctgcctggtctcc
accatggcagggggtctgggcctgaactttgtcggggccaacattgtggtcctgtttgat
cccacctggaaccctgccaatgacctgcaggcaattgacagggcatatcgtataggccag
tgcagggacgtgacagtgttcagactcatctctctgggaacagtggaggaggtcatctac
ctgcgccaggtctacaaacagcagttacagtcttctgtgatgggtaaggagagtgcccgg
cggtactttgatgcagtgcaggggtccgacgaccagaagggggagctgtttgggatacag
aacctcttcaggctgcagacccaggggacctgcctcaccaggagaatactggagcgggag
ggacgagtggaggtaggagtaatgacgtccagcacccacacaggggaagaggaggagagg
aagagcgagagcgaggctggggaggtttccgcaagggaccactgtgaactgggcaatgga
ggggcgatcggcagtgtaggggcctcgaggatccccagggcaacaaccaggggggtactg
gacttcagcagtggcagtgaggaggagggggaacagggggacaggagtaaggtggagaag
gcaaacactacccttcctggccgactcagtctccttcagcatggcttctccaggttgctc
cagaggtcaggggtcagggctggatcagggtcagaatcaggggagcatagccagagtgag
gggggaaggagtgattctgaagaggacagtgatgaagacacttctgccatggcaccaaag
ggcctcagcaccgcagggagtgggggcccccagacccctacattggcccccaagtgtggg
aaccacttggatgcagctcctctgaagaacgactgggacgtctccagtggctctgagaga
gaggaagaaaggaatggagggagatgggatggacagagggggcgagaccatgatcctgtt
acactgtctggagagagtgatgacatggggagaaaaatacaaaatcgaaaacaaggaata
aggaggaagaggagggtggaggaggacagtgatgatgattcacccccctccagtggaagc
aaacgatctaacactaaaactccagtttccagaatgcaccaggtgatgtttgactctgag
tctgaggacatagacattgaggagctaatcaaaccttgtgcacaaactcatgtgcttaag
agacccccagcacacctgagaaggagggagatggggagagatggtggtagtaagagagag
accagcaacagaccagtagaccagagtagaagaaccagacaagcagaggacattgagact
tttacctcctcagacgaaaaccacactgcagtcgaaagagtccgatctgttacagcccca
cagaaccacaatcatggccgaggcccacagacagaccaacacggagcgagggcgtttaca
aacccaaaagtgaaccagactgtcccttctgccaaaggaccgccctgtggaacgattgac
aatgtgttaggtggtgtacgggaggtggtttacacccactctaaccaacatgtggtgggc
gggagcaaggccgaggagcgaatcagcagagccgctctcagagacgtgtttgagcgcagg
aggttctcccagcttccagccaatgaactccgggacacacagaagacccagcctgaacac
actccaccattctatacttcccataataatgatgttggttgggtgggagcagtgcacaga
cccagtgtggaccacccagtcacacacaccatcaggagcgtccaccaccccacccaacac
accaccgtcattatcggagagacccccggaaccatccgaaggcagcagctggaggagatg
gcgtgtgtatttggatctgtttcattgagacagtttgctgaggaggttctgaggagtacc
tctgcccagagactggctcagctacgacagtactacactgaccagggccctgaggtggct
tccaccatcagggagaacttcgcagaaccacacacagcccagcccaaagttaacaggaca
accccttcctcctctacaaccaaacacagacccaactccaaaaggaaccagagagttgct
ctagaaccccaagcagaacctagaacccgacataggtccgttccagaaccccagagggat
gttccctcttctgaggagcagatggtccggaacgccagaggagggaagaagaagagtggt
aatagtggaatgtccagagctgctcagtgctccagctcagacctggacaatagtaggagt
agtcctctgggaccaggggcctctagagctcaacccgtttcctcctcctcctcctcttct
tcagctctcagccatccccaggctaagcccacagccagccctcagagagggaggagcagc
ctgctgtcctcccccaggaagagtgaggttgtggggaggcagcggtacagagctcagcct
tcctctccccccagccagcaggtcctcctcacagagctgctaggagacacctctatcctg
gacgacctgctacgacccaggagcaaggcctcctcagagccttcgagggccttcccaaaa
acccctacctcacgggctgtcttcacacccacttctcactctgccacacctgcctcctgt
caccctacaacgcctcccaaaccgcccagcacaccccaccctcggcccctgacaaaatcc
gtcccaggcccttcttctactactactactcccccctctcgatccatcaccacacccctc
acacaccccattacaccacttttctctccagcccctgagaggtcaaagaacagccacaga
gacttctgggacattttggaggagggtaacgaggagaggatcaacaaactgacggacccg
tcggaggtagagagggtgtgtgagagtgctagcgtcagggccagaggaggaacaggggga
ggagaggagaaagggaacacgtcactttggaagaggaacgacaagttcctgtggaagaag
tga

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