Oncorhynchus nerka (sockeye salmon): 115111933
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Entry
115111933 CDS
T07952
Name
(RefSeq) tight junction protein ZO-2-like isoform X1
KO
K06098
tight junction protein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115111933
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
Guanylate_kin
PDZ_2
SH3_2
SH3_1
Motif
Other DBs
NCBI-GeneID:
115111933
NCBI-ProteinID:
XP_029494342
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Position
LG27:34991087..35105013
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AA seq
1281 aa
AA seq
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MNLDCLQLGDWCSGARGGPWLRHTEEDQGGGGGGRGKRSAAGGQPRLEVPLLGGPWLNSE
ELRSSVVVLYAPAGNTCFLRLSSGMEETVWEQYTVNLQRDSKMGFGIAVSGGRDNPNVEN
GEMSIIVSDVLQGGPADGLLFENDRVIQVNSILMDNVPHSFAVQQLRKCGKTAKITVKRP
RKVALHSLKHPPSPGAESRDFGSTRYYDADDNQSDGGWHRGNGGPGYNREPRDLTPDNKS
YLDPNYGSRGNRGRSRGRSKERASPSPELHHDNSSGRALDREPPSPERPQYSRERSRGRS
MDRERRGGGGSPGGRSYSREDSYERGGGRYGDGGGTGGRMVKSKSRDNLREPPRSPSPDL
PRGGARDLEPLEKPVNVLLVKNRPNEEYGLRLGSQIFIKEMTSTGLAAKDGNLQEGDIIL
KINGTVTENLSLNDAGKLIEKSRGKLQLVVQRDRRQILIRIPPLVDSDSEPDDISEMESY
SPQEDRRSRQSDLSSHSSNERENPRPLTSLEDSPRVAKMSAMASPFRVPPLQDPNAPGPA
ILTSEGLPRLDEQPASAKITPKILLRPSPEDEELYGANTVMVSFQKGDSVGLRLAGGNDV
GIFIAGIQEGSPAEEEGLRTGDQIMKVNSVDFRGIVREEAVLFLLEIPKGEDVTILAQSK
PDVYNDILVSGRGDSFFIRTHFEYEREAPQSLAFSRGEIFKVVDTLYDGKLGNWLAIRTG
KDKQLLEKGIIPNKSRADQMASVQNSHKAAGTDRADFWRLRGQRAAKRKELRKSREDVSA
TPIATRFPAYERVVLREAGFRRPVVLFGPIADAANDKLANELPDLFVIAKTEPKDAGSEK
SSGVVRLNTIRQIIELDKHALLDVTPKAVDTLNYTQWYPIVIFFNPDSKPGVKAMRQRVI
PGSNRSARKLYEQAVKLRKTCSHLFTATIDVNSANDAWYGSVKDSIREQQTQAVWVSEGK
LDWTEMDLDLHDDRMSYLSAMSADYLSMDSRLASDYDDTADEGGAYTDNELDNEPADQLH
VSAISRSSEPVLAEEILRRCSPEIRGRVRRVGSREVLSSASPPPAFVPDPPKVKLLFRDE
VVPPIGSYEPPPSRGYDSHSSSPASDPPPLPRTLNSFGKAKPLAPPPIAIKPSYNTQDTT
RSTAPNTASFRGPEEPGESPEDPSLKSFLGKIKAFEKMDHFARTQRMLELQEAQNARLEI
AQKHPDIYAVPVKTQKLDHSRPQPIGSSSRPEPQTPPSKLPYSESCGFYPSEEEEYRRQL
ADHTKRGYYQTNNQKYQDTEL
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggattgcctgcagttgggggactggtgttcaggggcccgagggggtccatgg
ctgcgccacacggaggaggaccagggtggaggtggtgggggccggggaaagaggagcgca
gcaggaggtcaacccaggctggaggtgcctctcctgggaggaccctggctcaactcggag
gaactaaggagcagcgtggtggtgctctatgctcctgctgggaacacatgcttcctccga
ctgagctcaggaatggaggagactgtttgggagcagtacactgtgaacctacagagggac
tccaagatggggtttggtatcgctgtgtcgggggggcgggacaaccccaacgtggagaat
ggcgagatgtcaatcatcgtgtcagatgtcttgcagggaggaccagctgatggactactg
tttgaaaatgaccgtgtgatccaagtcaactccatcctcatggacaacgtgcctcattcc
ttcgctgtgcagcagctacgcaaatgtgggaagaccgccaagataacggtgaagagacct
cggaaggtggctctccactccctgaaacaccctccctcccctggtgccgagagtcgagac
ttcggctccacccgctactacgatgccgatgacaaccagagcgacgggggctggcatcgt
ggcaatggtggtcctggttacaaccgtgagcctcgcgacctcacccccgacaacaagagc
tacctggaccccaactacggcagccgtggtaaccgggggagaagccgggggaggagcaaa
gagagggcgtcgccaagcccagagcttcaccatgacaacagcagtgggcgggccttggac
cgggagccgcccagtccagagaggccacagtattcacgggaacgcagccgggggaggagc
atggaccgggagagacgagggggaggaggaagtccaggtgggaggagctacagccgggaa
gacagctacgagcgaggaggggggaggtacggggatgggggaggtaccggggggaggatg
gtgaagagtaaaagtagagacaacctccgtgagccgccccgttcgccctctcctgacctc
ccccgaggaggagctagagacctggagcccctggagaaacctgttaacgtcctgctggtc
aagaacagacccaacgaagagtatggtctgcgtctgggcagtcagatattcatcaaggag
atgaccagtacaggactggctgccaaggacggaaacctacaggagggagacattatcctc
aagatcaatgggacagtaacagagaacctgtctctgaacgatgcagggaagctcatagag
aagtctagaggaaaactccaactggtcgtccagagagaccgccgccagatcctcatccgt
atcccacccctcgtagactccgactccgaacctgatgatatctcagagatggagtcctac
tccccacaggaggaccgtagatctcgccagtcggacctatcttcccactcctccaacgag
agagagaaccccagacctctaactagcctggaagactctcccagggtagccaagatgtct
gccatggcctcgccctttagggtgccccccctacaggacccaaacgccccgggccctgcc
atactgacctcagaggggctgccacgcctcgacgagcaaccagcgtcagcaaagattact
cctaagattctgctacgccccagcccagaggatgaagagctctatggcgctaacacagtg
atggtgagtttccagaagggggacagtgtgggcctgaggctggcggggggtaacgatgtg
ggcatcttcatcgctggcatccaggagggtagtcctgccgaggaggaggggctacgcaca
ggagaccaaatcatgaaggtgaatagtgttgacttccgcggcatcgtgagagaagaggct
gttctgttcctgttggagattcctaaaggagaggacgtcaccatactggcccagagtaaa
cctgatgtctacaatgacatcctggtatctggtcgtggggactcgttctttatcaggact
cattttgagtatgagcgggaggctccccagagcctggccttctccagaggggagatcttc
aaagtggtggacactctctacgatggcaagctgggcaactggctggccatccgcaccggc
aaggacaaacagctgctggagaaaggcatcatccccaataagagcagggctgatcagatg
gcgagcgtacagaactcccataaggctgctggcacggaccgcgccgacttctggcgtctg
agaggtcaaagggcagccaagaggaaggagctgaggaagagcagagaggatgtcagcgct
acgcccatcgccacacgcttccctgcgtacgagagagtcgtgctcagagaggctggtttc
agacgtcctgtggttctgtttgggcctatagctgatgcagccaatgacaagctagccaac
gagctgcctgacctgtttgtcatcgccaaaacggagcctaaagatgccgggtcggagaaa
tcctcaggagtggtgagacttaacaccatccgccagatcatcgagctggacaagcatgcc
ctgctggatgtgactcccaaggcggtggacactctgaactacacccagtggtaccccatc
gtcatcttcttcaacccagacagtaaaccaggggttaaggccatgaggcagagggtgata
cctggttccaaccgcagcgctaggaaactatatgaacaggctgtcaaactgaggaagacc
tgctctcacctattcactgctactattgatgtgaactcggccaacgatgcgtggtatggc
agtgtgaaggactctatcagggagcagcagactcaggctgtatgggtgtctgaggggaag
ctggactggacggagatggaccttgatctccatgacgaccgcatgtcatacctgtcagcc
atgtcagccgactacctgagcatggacagccgattggccagcgactacgatgacacggcg
gatgagggtggggcttacacggataacgagctggacaacgagccggctgaccaactgcac
gtgtccgctatcagccgctcctctgagcccgtgctggcagaggagatcctgcgcaggtgt
agtccagagatccgtggtcgtgtcaggagggtgggcagcagggaggtgctcagcagcgcc
agcccaccccccgcgtttgtacctgacccccccaaggtaaagctgctgttcagggatgag
gtagtccctcccatagggtcatacgagcccccccccagccgaggctacgactcccactcc
tccagccctgccagcgatccccctcctctccctcgcacccttaactcatttggcaaggcc
aagccactggcacctccccccatcgccatcaaaccgtcctataatacccaggacaccacc
cgcagcacggccccaaacacagcgtcctttaggggcccggaggagccaggggagagccct
gaggaccccagcctcaagtcgttcctggggaagatcaaggccttcgagaagatggaccac
tttgcacgcactcagaggatgctggagctgcaggaggcccagaacgccaggttggagata
gctcagaagcacccagacatctatgctgtccctgtgaagacccagaaactggatcacagc
cggcctcagcctataggttccagctcgcgtcctgagccccagacccctccctccaagctg
ccatactctgagagttgtgggttctaccccagcgaagaggaagagtaccgacgccagctg
gcagaccacaccaagagaggctactaccagaccaacaaccagaaataccaggacacagaa
ctttag
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