Oncorhynchus nerka (sockeye salmon): 115112370
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Entry
115112370 CDS
T07952
Name
(RefSeq) radixin isoform X1
KO
K05762
radixin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04517
IgSF CAM signaling
one04530
Tight junction
one04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115112370
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115112370
09142 Cell motility
04810 Regulation of actin cytoskeleton
115112370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115112370
04147 Exosome [BR:
one04147
]
115112370
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Ezrin/Radixin/Moesin
115112370
Exosome [BR:
one04147
]
Exosomal proteins
Proteins found in most exosomes
115112370
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ERM_C
ERM_helical
FERM_M
FERM_C
FERM_N
Motif
Other DBs
NCBI-GeneID:
115112370
NCBI-ProteinID:
XP_029495253
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Position
LG3:52264713..52330542
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AA seq
572 aa
AA seq
DB search
MPKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYTDSKGYSTWLK
LNKKVTQQDVKKENPLQFKFRAKFFPEDVSEELIQEITQRLFFLQVKEAILNDENYCPPE
TAVLLASYSVQAKYADYNRDLHRPGYLTSDRLLPQRVLEQHKLTKEQWEDRIQIWHEEHR
GMLREDSVMEYLKIAQDLEMYGVNYFEIKNKKGTELWLGVDALGLNIYEHEDKLTPKIGF
PWSEIRNISFSDKKFVIKPIDKKAPDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTI
EVQQMKAQAREEKHHKQMERAQLENEKRKREHAEKERAKIEKEKDELVERLRQIEQQTLK
AQKELEEQTRRALELDQERKRAKEEAERLEGERQAAEEAKAALAKQSADQMKNQEQLAAE
LGEFTAKIALLEEAKRKKEEEATEWQHKAISAQEDLEKTKEELKSVMSSPPAPEHDEQDE
TNAEGSTELHSDGVTSHRSEEERVTEAQKNERVKKQLQALSSELAQARDDTKKTQNDMLH
AENVKAGRDKYKTLRQIRQGNTKQRIDEFESM
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaccgatcaatgtgcgggtcaccaccatggatgcagagctggagtttgccatc
cagcccaacaccaccggcaaacagctctttgaccaggtggtgaagacagtgggcctccgg
gaggtgtggttctttggcctgcagtacacagacagtaaaggctatagcacgtggctcaaa
ctcaacaagaaggtgacgcagcaggatgtgaagaaggagaaccctctgcagtttaagttc
agagccaagttcttccctgaggacgtgtctgaggaactcatccaggagatcacgcagaga
ctcttcttcctgcaggtaaaggaggccatcctgaatgatgagaactactgtcctccagag
acagccgtgctgctggcctcctactctgtccaggccaagtacgcagactacaacagagac
ctccacaggcctggctacctcacctccgaccgcctgctgccacagagagtcttggagcag
cacaagttgactaaggagcagtgggaggacagaatacagatctggcatgaggaacacaga
ggcatgctcagagaggactcagtgatggagtatctgaagatagcccaggacctggagatg
tatggcgtcaactactttgagatcaagaacaagaagggaacagagttgtggctgggtgtg
gatgcactgggactcaatatctacgaacacgaggacaagttgacaccaaagattggcttc
ccctggagcgagatcaggaacatctccttcagcgacaagaagtttgtcatcaaacccatc
gacaagaaagctccagattttgtgttctatgccccgcggttgcggatcaacaagcgtatc
ctggcgctgtgcatggggaaccacgaactgtacatgaggaggaggaagcctgacaccatt
gaggttcagcaaatgaaggcccaggccagggaggagaaacaccacaaacagatggaaaga
gcccagctagagaacgagaagagaaaacgagagcatgcggagaaggagagggcgaagata
gagaaggagaaggacgagcttgtcgagaggctcagacagattgagcaacagacgctaaag
gcccagaaagagctggaggagcagacacgcagggccctggagttggaccaggagaggaag
agagcgaaggaggaggcggaaaggttggagggagagagacaggcagcagaggaggccaag
gcagcgctggctaaacagtccgctgaccagatgaagaaccaggaacaactggccgctgag
ctaggagaattcactgccaaaatcgctctgcttgaagaggccaagaggaagaaggaagag
gaggcgactgaatggcaacacaaagccatctcagcccaggaagacctggaaaagactaaa
gaggagctgaagtctgtgatgtcatcacccccggcgccggagcacgatgagcaagatgag
acgaacgcagagggcagtaccgagctgcacagtgacggggtcaccagccaccgcagcgag
gaggaacgtgtcacagaggcccagaagaacgaacgcgtcaagaaacagctgcaggctctg
agttcagagttggctcaggcgagggacgacaccaagaagacccagaatgacatgctacat
gcggagaatgtgaaggctgggagggacaagtacaaaaccctgcgccagatccgacagggc
aacaccaagcagcgcattgacgagttcgagtccatgtaa
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