Oncorhynchus nerka (sockeye salmon): 115113403
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Entry
115113403 CDS
T07952
Symbol
hps6
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115113403 (hps6)
Membrane trafficking [BR:
one04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
115113403 (hps6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
Motif
Other DBs
NCBI-GeneID:
115113403
NCBI-ProteinID:
XP_029496853
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All DBs
Position
LG28:40725119..40731625
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AA seq
950 aa
AA seq
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MMQRMLEQVTDFVDFTRGTDLNEYLRQTYSNNRSCKNNLSDVRVSPDGRHIHVILRKPKV
GLMTFDKYQRPQQSQKHLDLGMTRAVPIVDIVYFDDKNRDGGVALLAVIFENGKAEFWKF
LELKGGWHPLHTADLCNSPRAKVISVSASQNYIVWCEERPPSESSLLVNETHNFRHCICK
RTYEVEEMAVSLGGMKIALHNNPRYNVISSGENVYLLPDLKDKSIMSLSKFFLMWSPRYD
TFRVSSTCKGNLLQKDSPSTKESDFRRLITDCTGYLSALSPPDIYGYSPTGSGGLLLLLS
TGWVSLLQKDGVLRQIYKLADNCLASSSAHNSLNVYQDTLALTIGRTLYLIDTTCGVELE
KIALKREGLLYVNRTERQAPHLLLETGLFVVMLRDGDPWGHDSDPKQKTPSLGTGESISP
AALLVEAVFEEACKYYQQRSLSSTRLTVEKLKRGGMFQAPITLANIVGDYLQSRGERGVE
LPQGGGRRGQEKLLGSLEAELKGLVSLEEVKGGLVKEREVEDVCESLVQQEVGRLLLLSE
LNRDSLLYLNSIFSLFPGQAWRATQSALQLRCNGEGSLSSKVPPEVWKTVLSPVQAPTVT
ANLPYTNGNSQSKHKPPKPYPSTGSSFKLSPSLSSNSSPPAANSALPVFELLCHSVFCFQ
PSWLPRFLELAQQQQTSAGLGMGLGLGGSTWSYSGGRGFSENGESLPLYKRALSALPLPG
PGSDLKQYPDYEQNQDLEVDLLLVSGRPNAVLQALRILMGRRQWERVTQVAQRFCRQSPL
LNKEIFTTLLCEVAQHRDLDPYLDLLWALCPEDLTVTAILNIVLKNMPSSSSLSTSFSPS
SNIPPSSPFADPQSSQLTFGLLKPLLSKVLQRETRPNQRYADILQSPSFPPPTPPRQAKG
LPRSTTEPSIGLDQQHNDVIGNMAAILDQHDPSKHRTVHGGRVTSTPNPD
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacgaatgttggaacaagtgacagatttcgtggactttactagaggtacagat
ttaaacgagtatctaagacagacgtattcgaataacagaagttgcaaaaacaatctatca
gatgtgcgcgtgagcccagatggacgccacattcacgtcattctccgcaaacccaaggtt
ggtctcatgacttttgacaaatatcagagaccgcagcagagccaaaagcacctagatttg
gggatgactcgggctgtgcccattgtggatattgtatattttgacgacaaaaacagagac
ggcggtgttgcgctgttagctgtcatattcgagaatggaaaagcagagttttggaaattt
ctggaactcaaaggggggtggcatcccctgcacaccgcggacctttgcaacagcccccgc
gctaaagtaatctctgtctcggccagtcagaactacatcgtctggtgtgaggagcggcca
ccgtcagagagttcattacttgtcaatgagacccacaatttcaggcactgcatctgcaaa
cgaacctatgaggtggaggaaatggctgtcagtttagggggcatgaaaattgctctgcac
aacaacccccgctacaacgtcatcagctcaggtgagaatgtttacctactacctgatttg
aaagacaaatccatcatgtccctctccaaattctttctcatgtggtccccccggtatgac
acattcagagtgagcagcacctgtaaaggtaatctcctccaaaaagactcaccttctact
aaagaatctgactttagaaggttgataacagactgcacgggatacctatcagcccttagc
ccccctgatatatatggctactcccccactggcagtggaggcctgttactgctgctcagc
acaggttgggtcagtctactacagaaggatggggtgttacgacagatctacaaactagct
gacaactgcctagccagcagcagtgcccataacagcctgaacgtgtaccaggacaccctg
gctctgaccatcggacggaccctctacctgattgacactacgtgtggtgtggagctggag
aaaatagccctgaagagagaggggctactctatgtgaacaggaccgagaggcaggcacca
cacctgctgttagaaaccggcctatttgtagtgatgctccgggacggcgacccctggggc
catgactctgacccaaagcagaagaccccgtccctgggtacaggagaaagcatcagccct
gcggctctactggtagaggctgtgttcgaggaagcctgtaagtattaccaacagagaagt
ctcagcagcactcggctcactgtggagaagttaaagagaggagggatgttccaggctcct
atcactctggcaaacatcgtcggagactatctccagagcaggggggagaggggagtggag
ttaccccagggaggaggcaggagaggacaggagaagctgctcgggtccctggaggctgaa
ctgaaggggctggtctccctagaggaggtgaaggggggattggtgaaggagagggaggtg
gaggatgtgtgtgagagtctagtgcagcaggaggtggggagactcctcttgttgtcagag
ctcaaccgagactctctactctacctcaactccatcttcagcctgttccccggtcaggcc
tggagggccacacagagcgctctgcagctacgctgcaacggagagggctctctctcctct
aaagtgcccccggaggtctggaagactgtcctcagccctgtacaggcccccactgtcacc
gcaaacctgccctacaccaatggcaacagccagtctaaacacaagccacccaaaccttac
cccagcactggctctagttttaaacttagccccagccttagctccaactccagcccacct
gccgctaactcggccctgcctgtcttcgagctcctgtgccactccgtcttctgcttccag
cccagctggctgcccaggttcctggagctagcccagcagcagcagacctctgcaggcttg
gggatgggtctaggccttggcggttccacctggagctactctggaggtaggggattttca
gagaatggagagagcctccccctgtataaacgtgccctttcagctctgcctctacctggc
cccggatcagacctgaaacaatacccagattatgaacaaaaccaggacttggaggtggat
ctccttttggtgagtggtaggccaaacgctgtcctccaggctctgaggatcttgatgggg
agacgacagtgggagagggtaacccaagtggcccagcggttctgcaggcagagtccctta
ctgaacaaagagatctttactaccttactgtgtgaggtggcccagcatcgagacctggat
ccatacctagacctcctctgggctctgtgtcctgaagatcttacggtcacggccatactt
aacattgtgctgaaaaatatgccctcatcatcttccttatctacatccttctccccctcc
tcaaatatccctccctcctctccctttgctgacccccagtccagccagttgacctttggg
ttgttgaagccgttgctcagtaaggttctacagagagagaccaggcccaaccagcgatat
gctgacatcctccagtcgccctcgttcccccctcccacgccccctcgtcaggctaaagga
ctgcctaggtccaccaccgagcctagcataggcttagatcagcagcacaatgatgtcatc
ggcaacatggcggccatcttggatcaacacgacccatctaaacacaggactgtccacggg
ggcagggtgacctctactccgaaccccgactga
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