Oncorhynchus nerka (sockeye salmon): 115113420
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Entry
115113420 CDS
T07952
Name
(RefSeq) stromal cell-derived factor 1-like
KO
K10031
C-X-C motif chemokine 12
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04060
Cytokine-cytokine receptor interaction
one04672
Intestinal immune network for IgA production
one04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115113420
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115113420
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
115113420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
one04052
]
115113420
00536 Glycosaminoglycan binding proteins [BR:
one00536
]
115113420
Cytokines and neuropeptides [BR:
one04052
]
Cytokines
Chemokines
115113420
Glycosaminoglycan binding proteins [BR:
one00536
]
Heparan sulfate / Heparin
Chemokines
115113420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
DUF5580_M
Motif
Other DBs
NCBI-GeneID:
115113420
NCBI-ProteinID:
XP_029496884
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All DBs
Position
LG28:complement(41781170..41828296)
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AA seq
98 aa
AA seq
DB search
MDLKYFAVMVVLAVATYAPFSQAKPISLVERCWCRSTVNTVPQRNIRELKFLHTPNCPFQ
VIAKLKNHKEVCINPETKWLQQYLKNALNKMKTSKQTN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaaatactttgcggttatggttgtgctcgctgtggcgacatacgctcctttc
tcacaagctaaaccaatcagtctggtggagaggtgttggtgtcgttctacagttaacacc
gtcccccagcgtaacatccgagaactgaagttcctacacacacccaactgccccttccaa
gtgattgccaagctgaagaaccacaaggaggtttgtatcaatcccgagaccaagtggctg
cagcagtacctgaagaatgccctcaacaagatgaagacatccaagcagaccaactag
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