Oncorhynchus nerka (sockeye salmon): 115113472
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Entry
115113472 CDS
T07952
Name
(RefSeq) oxysterols receptor LXR-alpha-like isoform X1
KO
K08536
liver X receptor alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03320
PPAR signaling pathway
one04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115113472
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
115113472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115113472
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115113472
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115113472
Nuclear receptors [BR:
one03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
115113472
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
115113472
NCBI-ProteinID:
XP_029497016
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Position
LG28:47544171..47573178
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AA seq
430 aa
AA seq
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MKHEGNLLPLEPPHHAGFSSPPQKGPSSLAEKSSLLLMEPSNIKADPAGDMPANTEGQPV
KRKKGPAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKSAQYSCKNNGRCEM
DMYMRRKCQQCRLRKCREAGMLEQCVLSEEQIRGKKMKKNEEETARTSAVVTPTPVPEVV
PLEPEQLEMIEKLVAMQKQCNKRSFIDRPKVTVIPWPQSQDPQNREVRQQRFAHFTELAI
MSVQEIVDFAKQLPGFLELTREDQIALLKTSTIEIMLLETSRRYNPAIESITFLKDFSYN
KEDFAKAGLQLEFINPIFEFSKGMNDLHLDEAEYALLIAINIFSAGQRSSDRPNVQDHEL
VERLQQPYVNALRSYIMIKRPNDHLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPP
LLSEIWDVHE
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatgagggaaacctcctccccctggaaccaccccaccatgcagggttttccagt
cccccccagaaagggccttcctcactagctgagaagagcagcctgctgctcatggagccc
agcaacatcaaggctgaccctgccggcgacatgcctgccaacacagagggccagccggtg
aagaggaagaagggtccagcccccaagatgctggggaacgaggtgtgcagcgtgtgcggg
gacaaggcctcgggcttccactacaacgtgctgagctgcgagggctgcaagggcttcttc
cgccgcagcgtcatcaagagcgcccagtactcgtgcaagaacaacggccgttgtgagatg
gacatgtacatgcgccgcaagtgccagcagtgccggctgcgcaagtgccgcgaggcgggc
atgctggagcaatgcgttctctcagaggagcagatccgagggaagaaaatgaagaagaac
gaggaagagactgcacgcacgtctgccgtggtgacccccaccccggtgccggaggtggtc
ccgctggagcccgagcagctggagatgatcgagaagctggtggccatgcagaagcagtgc
aacaagcgctcgttcatcgaccggcccaaagtcacggtgattccgtggccccagagtcag
gacccccagaacagggaggtacggcagcagcgctttgcccacttcaccgagctggcaatc
atgtcggtccaggagatagtggactttgccaagcagttgcctggcttcctagagctcacc
agagaggaccagattgccctgctgaagacctcaaccattgagatcatgctgctggaaaca
tcgcggagatataaccctgccattgagagcatcacgttcctgaaggacttcagttataac
aaggaggattttgccaaagcagggctgcagttggagtttatcaaccccatctttgagttc
tcaaagggcatgaatgacctgcatctggacgaggcggagtacgctctgctcatcgccatc
aacatcttctctgcaggtcagaggtcaagtgaccggcccaatgtgcaggaccatgaactg
gtggagcgactacagcagccgtatgtgaacgcacttcgttcttacatcatgataaagaga
ccaaacgatcatctgatgtttccacgcatgctcatgaagctggtcagcctccgcaccctc
agcagcgtccactctgagcaggtcttcgccctgcgcctccaggacaagaagctcccgccg
ctgctatctgaaatctgggacgtccacgagtga
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