Oncorhynchus nerka (sockeye salmon): 115114646
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Entry
115114646 CDS
T07952
Name
(RefSeq) nectin-4-like
KO
K06593
poliovirus receptor-related 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
one04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
115114646
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115114646
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115114646
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
Nectin family
115114646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
Ig_2
ig
C2-set_2
Protocadherin
RIFIN
He_PIG
TMEM154
Neur_chan_memb
EphA2_TM
DUF6377
V-set_CD47
DUF6249
NICE-3
DAG1
Tmemb_9
LapA_dom
Miga
PRIMA1
Stevor
Orf78
Motif
Other DBs
NCBI-GeneID:
115114646
NCBI-ProteinID:
XP_029498920
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All DBs
Position
LG9b:complement(31257399..31267601)
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AA seq
598 aa
AA seq
DB search
MELPVQGQSQWGTAWLVLWAFAVCVRGGFVEPPPSFSLRSLTEVETRLPCQFQVQEEEQV
VQVSWFKELPDGTKEQIITAHLTEGHTEFGRYSGRVRFESSSPTVDSALLIMNTEESYEG
KYTCHISTFPYGNFERQLSLTVWTLPISSLDPVVLEEGQSFRIAASCRSVARPPPRLTWD
TDLPGQNQTRSSEGGAVSTHFSLHPLRSMNGMRLDCLVWHPALEQPRRISNRLVVQFPPD
AAVTGYNGNWYMGLKGAELKCETGGNPKPQSFTWTRGGKALPDGLTVNGARLLFGRALRQ
NDTGVYECVVNNGIGTRKVESNITVTEKIHSVQETTVDTLVMIIIVVAAGVLVIVMIIII
ILVNRYHRRKNRKLEMELSERTLKINTLSRQNSSRRLNSVSTDPRGQNEDCTLLRLDSRM
KNSLMSLEDRPIYIGSESSLGGRRGTVGEGDVDYLGRPVLYQSSWHEGRESMRGAEMEGE
REERRRRVESYLKRSNMSLDSGLPSSLVPIKPQDQDGSVGPTDIPPMLSDLCGQREGVTK
GEDWGHRRAVLEVDEADCDTSSYQISEALSNHFHYSNGFLRPKPHSNAILLHPRGQII
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggagttacctgtccagggccagagccagtggggcacagcgtggttggtgctatgggca
tttgcagtgtgtgtgaggggtgggtttgtggagcctcctccatccttctccctgcgttcc
ttgacggaggttgagacgcggctgccctgtcagtttcaagttcaggaggaggagcaggta
gttcaggtcagctggttcaaggagctacctgatggcaccaaggaacaaatcatcactgcc
cacctcacagagggacacacagagtttgggcgatactctgggagagtgaggtttgagagc
agtagccccacagtggactctgccctgctcatcatgaacacggaggagtcttatgagggg
aaatacacctgtcacatcagcacattcccctatgggaactttgagaggcagctgtcactc
actgtgtggaccctaccaatctcctctctggacccagtggttctggaggagggccagtcc
ttccgcatagctgcctcctgccgctctgtggcccgtcctccacctcgactgacctgggat
acggatctccctggtcagaaccagacccgcagctccgagggcggggccgtgtccacccac
ttctccctgcaccccctgaggagtatgaacggcatgcggctggactgcctcgtctggcac
cctgctctggagcaaccccggaggatcagtaaccgcctggtggtgcaatttcccccagat
gcagctgtcactggctataatggaaactggtacatgggactgaagggagctgaactcaag
tgtgaaactggaggaaaccccaaaccacagagcttcacctggaccaggggtggtaaggcc
ctgccagacggtctcactgtgaatggagcaaggcttctgtttggccgagccctgagacag
aatgacactggagtttatgaatgtgtggtgaacaacggcattgggacaaggaaagtagaa
tcgaacatcacagtgacagagaaaattcacagtgtgcaggaaaccactgttgacactcta
gtgatgatcattatagttgtggctgctggggttttggtcatcgtcatgatcatcatcatc
atcttagtcaaccgataccacaggcgcaaaaacagaaaattagagatggagcttagcgaa
agaacgttaaaaatcaacacactctccagacagaactcctcccggagactcaactctgtc
agcacagaccccagaggacagaatgaagactgtacactactcagactagacagtagaatg
aaaaacagcctaatgtcccttgaggaccgtcccatctacataggcagtgaatcatccctg
ggtgggaggcgggggactgttggagagggggatgtggactacctaggacgccctgtcctg
taccagtctagctggcatgagggcagagagagtatgaggggcgcggagatggagggagag
agggaagagcgcagacgaagggtggagtcgtacctgaagagaagcaatatgtccctggac
tctggccttccttcctcccttgtccccatcaagccccaggaccaggatggcagtgtgggg
cccacagacatccccccaatgctcagtgacctgtgtggccagagggagggggtgaccaaa
ggggaagactggggccacagaagggcagtgctggaggttgatgaggcagactgtgacacc
agttcttaccagatctcagaggcgctctccaaccacttccactacagcaacgggttcctg
cggcccaaaccacactccaacgccatcctcctacaccccagaggacagatcatctag
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