Oncorhynchus nerka (sockeye salmon): 115114861
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Entry
115114861 CDS
T07952
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1-like
KO
K20894
shank-associated RH domain-interacting protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04217
Necroptosis
one04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
115114861
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115114861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115114861
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
115114861
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Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
ubiquitin
Motif
Other DBs
NCBI-GeneID:
115114861
NCBI-ProteinID:
XP_029499213
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Position
LG9b:27257321..27268386
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AA seq
243 aa
AA seq
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MDPSKAGEFRLALRDSSGSGRSVNKGRTVLIAANSSPHPLDDRQKHTAAVALEQRRTDSL
TLTEELRLELARAIEAGDSQAAAQHASALAHQKVALTIQLSEKSYAEGEIRLAVAVEDIS
SSCCVTVKVFPHMTVAALKQQVFLEYGFHPRVQRWVIGQCLCTEPRSLASYGVQRDGDMA
YLYLISARHACCSSRTRRASSSPHLCLPATGLRPRTGGATAPCPPGSATTPRGAPDVRLT
GWV
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggaccccagcaaagctggagagtttcggctagcactgagggacagtagcggaagcggc
cgtagtgtgaacaagggaagaaccgtactaattgctgcaaatagttccccacatcctctg
gatgaccgacagaagcacaccgcagcagtagctctagaacagcgccgcacagactcctta
acactcactgaggagctgcgcctggagcttgcccgggcgatcgaagcaggcgacagccag
gctgctgctcagcatgcatctgctctggctcaccagaaggtggcgctcaccatccaactg
tctgagaagagttacgcagaaggagagatacgtttggctgtggcagtggaggacatttcc
tcttcctgttgcgtcacagtgaaagttttcccacacatgaccgtcgcagcactcaagcag
caggtgtttctggagtatggcttccaccctcgcgtgcagcgctgggtgatagggcagtgt
ttgtgcacagagcccaggtccctggcctcgtatggagtccagagggatggggacatggcc
tacctctacctgatctcagcccgccatgcctgctgttccagcaggaccaggagggcatcc
tcctcaccccacctctgcctaccagcaacgggtctacgtcccaggactggaggggctaca
gcaccctgccctccaggctcagccacaactcccaggggagcaccggacgtgaggctgaca
ggctgggtatga
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