Oncorhynchus nerka (sockeye salmon): 115116231
Help
Entry
115116231 CDS
T07952
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2-like
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115116231
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
one04054
]
115116231
Pattern recognition receptors [BR:
one04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115116231
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_NLRC3
NLRC4_HD2
LRR_6
LRR_TMOD-LMOD
WHD_NOD2
CARD
LRR_CARMIL
AAA_16
nSTAND_NTPase5
AAA_29
AAA_22
AAA_30
T2SSE
Viral_helicase1
Sigma54_activat
nSTAND3
AAA_25
NB-ARC
Motif
Other DBs
NCBI-GeneID:
115116231
NCBI-ProteinID:
XP_029500575
LinkDB
All DBs
Position
Unknown
AA seq
926 aa
AA seq
DB search
MITFLFNCIAFNQVLPEAQRAGLSFGNCRTANLENTRDDRKELHGTAIQTLQTDRPDLVR
RLRDHIEGALEVLLHTGSFTPSDCDEVQLTVYTPSQQARRLLDQVRSKGEPAAKVLLQYF
QQTEDHPPPSNQEAPPKECLSYQKKLRSTVSAQSHFLRTYGGTSSLSLEDIYTEGQLELA
QGGSEAQPQTGALGLEDVVGLVGTLNQEADTVLVSGEAGSGKSTLLQRLHLLWARGAALH
DFFLLFSFSCRRLSSEQRELSLRELLFLHCCWPDGDQDRIFQFILDHPHLILFTFDGLDE
LMQSFSDSEQRHCCPTQRAPVPTLLFNLLQGSLMKGVRKVVTSRPEAVGPTLKRYLRKEV
FLKGFSPGGIDCFVRKYHRDPTVATRVLECLRSNTALLGLCHIPVFCWIVSKCYKELLGC
GEGEGSPQTITDVYLMILQHLFQRRASQRNTMGIGWVQEHQDTALHLGQLAMEGLGASCY
IFTGTELQKCGVTEEDICMGFLIHSKDLSSSTNCKHYEFLHITMQCFFAALYIVLNNNSD
RSTIPKLFQPQDRQQQPGFHRACLGHCLTQQEGALKEANKAAETPNLQITATFVSGLLAQ
RHRSLLLLSCPGPTLDRKSKQVVTCLSKGMQKHFKSIPRPVEGEKKSMHAMPGFVWLIKC
IHEMQDSRIARYTMAKLEVEHLKLTYCNIGPVECTALAYVLQHLRNPVGLQLDYNYVGDV
GVEQLLPCLHVCHSVYLRHNNISDEGIRKLIEKGIQCERFQKIALFNNKLTDACTECFAH
LLKMKQNFLSLRLGNNNITAAGAGQLAEGLRFNRSLQFLGLWGNKIGDKGAEAIANALKD
SQTLVWLSLVDNGVGNAGACALAPLIKNSTLEELWLTKNCITRTGVECLILALESNTSVK
AVWLRGNELSPEEVEEMTQREPRLTF
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgattacatttttatttaattgtattgctttcaaccaggtcctccctgaggcccaaaga
gctggcctctcttttggaaactgtcgtactgccaatctagaaaatacaagagatgataga
aaagaactacatggtacagctatccagaccctccagacagacaggcctgatctggtgagg
aggctaagggaccatattgaaggagctctggaggtcctgctgcatacgggcagctttaca
ccatctgattgcgatgaagtgcagctaactgtgtacaccccctcacaacaggcaaggcgt
ctactggaccaagtcagatcaaagggggagcctgcagcaaaggtcctactgcaatacttt
cagcaaacagaggaccatcccccaccatctaaccaagaggctcctcccaaagagtgcttg
tcctatcagaagaagctgcgcagcactgtgtcggcccagtcacatttcctcagaacgtat
ggaggaaccagcagtctgtctctagaagacatctacacagagggtcagctggagcttgcc
cagggtggcagtgaggcccagccccagactggtgctctggggctggaggacgtggtgggc
ctggtgggcaccctgaaccaggaggctgacactgtgctagtctctggggaggcaggcagt
gggaagagcacccttctccagaggctgcacctcctttgggccaggggggcggctctacat
gatttcttcctcctcttttccttcagctgccgcaggctgagctcggaacagagggagctg
tctctcagagagctgctgttcctgcactgctgctggccggacggggaccaggaccgaatc
tttcagttcatcctggaccatccgcacctcatcctcttcaccttcgacggcctggacgag
ctcatgcagagcttctcggactcagagcagaggcactgctgccccacccagcgtgccccc
gtccccaccctgctcttcaacttgctgcagggatccctcatgaagggggtgaggaaggtg
gtgaccagccggccagaggcagtgggtcccaccctgaagcggtaccttcgcaaggaagtc
ttcttgaaaggcttctcgcctggcgggatcgactgcttcgtgaggaagtatcatcgcgac
ccgacggtggccaccagggtcctggagtgtctacgaagcaacacagctctactgggcctg
tgtcacatcccggttttctgctggattgtgtccaagtgttataaggagctgctgggctgt
ggagagggagagggcagtccccagaccatcacagatgtttacctcatgatcctgcagcac
ttattccagcgccgggcctctcagaggaacacgatggggataggatgggtgcaggagcac
caggatactgccctgcatctggggcagctagccatggagggcctgggggcctcctgttac
atcttcacaggcacagagctacagaagtgtggggtgaccgaggaagatatctgcatgggg
ttcctcatccatagtaaagacctctcctcctccactaactgcaaacactacgagttcctg
cacattaccatgcagtgcttctttgctgctctctacattgtactgaacaataactcggac
cgctccaccatccctaagctctttcagccgcaggacaggcagcaacagcctggctttcac
agggcgtgtctggggcactgcttgacccaacaagaaggggccttgaaggaggccaataag
gcagcagagacccccaacctccagataacagctacttttgtgtctgggctcttggctcag
cgccaccgtagcctgctgctcctctcctgccctgggcccactctggacaggaagtccaag
caggtggtgacgtgcctgtccaaaggcatgcagaagcactttaaatccatccctcggccc
gtggagggggagaagaagagcatgcacgccatgccgggcttcgtgtggctcatcaagtgc
atccatgagatgcaggacagcaggatcgccagatacactatggctaagctagaggtggaa
cacctgaagctgacctattgtaacataggccctgtggagtgtactgcactggcctacgtg
ctccagcaccttaggaaccctgtggggcttcagctagactacaactatgtaggagacgtt
ggcgtggagcagctgctgccttgcctgcatgtatgccactctgtatacctgagacacaat
aacatatcagatgagggaattcgtaaattgattgaaaaaggcatccagtgtgagcgcttt
cagaagattgcgctcttcaacaacaagctaactgatgcctgcacagagtgcttcgctcac
ctcctgaagatgaaacagaattttctctctctaaggctgggaaacaataacatcacagca
gcaggggcagggcaactggcggagggactgaggttcaatcggtcactacagttcttgggg
ctttggggaaataaaattggtgataaaggtgcagaggccattgccaatgctctcaaagac
agccaaaccttggtgtggctcagcctggtagacaatggtgttggcaatgcaggagcatgt
gctcttgccccactcatcaagaacagtacgctagaggagctgtggttaaccaaaaactgc
atcacaagaacaggtgtggagtgtctaatactggctcttgaaagcaacactagtgtgaag
gcagtgtggttgagaggtaatgagctcagcccagaagaggtggaggagatgacacagcgg
gaacccaggcttacattctga
DBGET
integrated database retrieval system
