Oncorhynchus nerka (sockeye salmon): 115118093
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Entry
115118093 CDS
T07952
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic-like isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00280
Valine, leucine and isoleucine degradation
one00650
Butanoate metabolism
one00900
Terpenoid backbone biosynthesis
one01100
Metabolic pathways
one03320
PPAR signaling pathway
Module
one_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
115118093
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
115118093
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
115118093
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
115118093
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
115118093
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
PS_Dcarbxylase
Lectin_C_term
Motif
Other DBs
NCBI-GeneID:
115118093
NCBI-ProteinID:
XP_029502500
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All DBs
Position
LG4:complement(2831166..2859619)
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AA seq
527 aa
AA seq
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MIVSSYRMPGSAPANGEATWPKDVGVIALEIYFPSQYVDQAELEQFDGVSAGKYTVGLGQ
ARMGFCSDHEDINSLCLTVVQRLMERNGLSYDQVGRLEVGTETIIDKSKSVKTVVMQLFE
ESGNTDVEGIDTTNACYGGTAALFNAVNWVESSSWDGRYALAVAGDIAVYATGSARPTGG
AGAIAMLVGPNAPLAFDRGLRGTHMQHAYDFYKPDMASEYPVVDGKLSIECYLSALDRCY
SVYRNKIHAQWQREGVDKRFSLEDFGYMVFHSPYCKLVQKSLARLVLSDFLSHPRPNTET
GPFSGLEAFREVKPEETYFNRDVEKAFMKASTEMFDQKTKASLLVSNQNGNMYTPSVYGC
LASVIAQHTPQHLAGQRIGLFSYGSGFAATLYSLRVSQDATPGSGLDKLCASLCDLKARL
DSRRKVSPAMFAENMQLREDTHHLAPYVPQGAVEELFPGTWYLTRVDEKHRREYSRRSLN
DDLPLEAGLVNSTTATEQHIPSPVKKMPRLPASTAGPEAVTVSNGDH
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaagctcatacagaatgcctggatcagccccagccaacggcgaggccacgtgg
cccaaagatgtgggcgtcatcgccctggagatctacttcccctcacagtatgtggaccag
gccgagctggagcagtttgacggcgtgtcggccggcaagtacacggtgggcctaggccag
gcgcgtatgggcttctgctcggaccacgaggacatcaactccctctgcctgacggtggtc
cagcggctgatggaaaggaatggcctctcctacgaccaggtgggccgtttggaggtgggc
actgagaccatcatcgacaagtccaagtcggtgaagacggtggtgatgcagctgttcgag
gaatcgggcaacacggacgtggaggggattgacacgacaaacgcttgctatgggggcacc
gccgccctcttcaacgccgtcaactgggtggagtctagctcctgggacggtcgttatgcc
ctggcggtggcaggagacattgcagtttacgccacaggaagtgcccggccgacagggggc
gccggtgcgatagccatgttggtagggcccaacgccccactggcttttgacagaggtctg
cggggtacacacatgcagcacgcctacgacttctacaagccagacatggcgtcagaatac
cctgtggtggacggaaagctgtctatcgagtgctacctcagcgcgttagatcgctgttac
tctgtctaccgcaacaagatccatgcacagtggcaaagagagggtgtggacaagcgtttc
agcctggaggactttggctacatggtgttccactctccctactgcaagctggtgcagaag
tccttagcccgtctggtgctcagtgacttcctcagccaccccaggcccaacacagagact
ggaccattcagtggcctggaggctttcagggaggtgaagccggaagagacctacttcaac
agggatgtggagaaggccttcatgaaggccagcacagagatgtttgatcagaagaccaag
gcttccctcctcgtctccaaccagaacggcaacatgtacaccccctctgtctacggctgc
cttgcttctgtcatcgcacaacacacacctcagcacctggcgggccagagaatcggcctg
ttctcctacggctcagggtttgccgccacactctactccctccgagtctcccaggacgcc
acgcctggctctggattggataagctctgtgccagcctgtgtgacctcaaggccagactg
gactccaggaggaaggtgtcacctgccatgtttgcggaaaacatgcagctgagggaagat
acccaccacctagcaccgtacgtgccccagggcgctgtggaggagctgtttcctgggacg
tggtatctgacccgggtggacgaaaagcaccgtcgggagtactccagacgctccctgaac
gacgacttgcccctggaggctggcctggtcaactccaccacagccactgagcagcacatc
ccaagcccagtgaagaagatgccccgcctccccgcctccacagctggtcctgaggcagtc
accgttagcaatggggatcattaa
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