Oncorhynchus nerka (sockeye salmon): 115122285
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Entry
115122285 CDS
T07952
Symbol
trpm2
Name
(RefSeq) transient receptor potential cation channel subfamily M member 2
KO
K04977
transient receptor potential cation channel subfamily M member 2 [EC:
3.6.1.13
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115122285 (trpm2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115122285 (trpm2)
Enzymes [BR:
one01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.13 ADP-ribose diphosphatase
115122285 (trpm2)
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115122285 (trpm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
LDcluster4
Motif
Other DBs
NCBI-GeneID:
115122285
NCBI-ProteinID:
XP_029507347
LinkDB
All DBs
Position
Unknown
AA seq
1331 aa
AA seq
DB search
FACHSKGICKCGYQRIHHVDDSIKPENYLGETWDRHRHVHEVPTDAYGDIWFGGLGQKIG
KYVRVSSDTSPDLLYQLLTEQWKLPPPNLLISVTGGAKNFYMKPHLTALFRRGLIKVAQT
TGAWIITGGTHAGVMKHVGQAVREHVLSSGSMEGQIVAIGVATWGAIHNRRPLVHLEGRF
PAHYSLDMQSQGHLSCLDNNHSHFLLVDDGTHGCYGVEIELCSRLERLISQQPLGNRGTL
SVSIMCVVLNGGPGTLSTIYGAMLNRTPCVVLEGSGRLADVLAHVAGLPVTKVTLSVVHQ
LMKRFFGLEYESFTELKIIEWTKKIQDIIRMPQLLTVFRMSEDNHGDVDVAILQALLKAN
RSSESVGMERWERQLELAVAWNRVDIAKTDIFTEDSQWKSSDLHQAMFSALLGHKPQFVR
LLLENGVCLREFLGDQTTLCDLYTQLPTSCFFPRRLAKRIQTEKSRRSQTLSPRGAAGRT
ISLSHVSDEIRHLLGSFTQPLYPLPGLHSTRYPKEPKEDVAVTLPPKEQLELQASPDPDR
GPGRDSERGEETFRDPGRDLFLWAILQNQKELAEIAWEQSRDCTSAALAASKILKKLAEE
GAEEEDEAEEMRELAKHYERHAIGVFNKCHCCDEERAQRLLIRISSSWGQTTCLRLALEA
DDKSFVAHSGVQALLTQIWCGELAADNPLWRVLLCMLFFPLIYTGFLGFRRDESIQREAE
RSAELLTMESLTGSQACTRRKYPVHDLPARNPLGLKPLTVSTRLVSLFTSPQVKFYWNIL
SYFSFLLLFSVVLMIDFQTTPSWREGLLYVWLISLICEEVRQLFHDPDGFGFRKKADMYI
NDMWNILDFLSILLFIIGLAFRLTTRLFYAGKVILCIDFIIFCLRLMAIFIISKTLGPKI
IIVRRMMLDMFFFMFLLSIWVVAYGVAKQGILIHNEDRLDWIVRGVIYEPYLIIFGNMPS
NIDNALFDIKACSVNGTESQKPKCPILNEDKMPAFPEWLTIILLCVYLLFANILLLNLLI
AIFNYTFQEVQDNTDTIWKFQRYELIKEYHSRPAAPPPLILLSHIFLFIRRIVLQRPPNS
YRAFKERLPEVEEEELLSWESFMKDNYLLSCRQQQSQSMEQRTADTANKVCTITELLQRE
EATGSVALVKRLTRLEEQVSQSARALQWIMDTLKAQGLHSKEEAPQLASPGKLKRSESEP
NEPHRQEKTEREKTFYHVNARRLDYPDSTIPRFPVLEEKVPWEVDFILYNPPVLNGDSQD
QTDGSEPDSVKRYRNPGGRTGMKGRGALTCLGPNLILDPVLTRYEAPQIDNSLLCIPNVY
SVVVDLLRALL
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
tttgcctgccacagtaaggggatctgtaagtgtggttaccagaggatccaccatgttgat
gactctatcaaacctgagaactacctgggagagacatgggacagacacagacacgtacac
gaggtccctactgacgcttatggagacatctggttcggtggccttggacagaagattggc
aagtacgtgcgcgtctcctcagacacttctccagaccttctgtaccagctgctgacagaa
cagtggaagctccctcctcccaacctgctcatctctgtcaccggaggggccaagaacttc
tacatgaaacctcacctcacagcactgttccgcaggggcctcattaaagtggcacagact
acaggtgcctggatcattacaggtggcacccatgcaggtgtgatgaagcatgtaggccag
gcggtgagggaacacgtcctcagtagtggctctatggaagggcaaatcgtggccattgga
gttgcgacctggggagccatacacaacaggagacccctggtacaccttgagggccggttc
ccagcccactactctctggacatgcagtctcagggtcacctctcctgtctagacaacaac
cactcccacttcctgctggtggatgatggaacacacggatgctacggagtcgagatagaa
ctatgctcccgactagagagactaatctcccagcagcctctgggaaacagaggcactctc
agtgtgagtatcatgtgtgtggtgctgaatgggggaccaggcactctcagtaccatctac
ggtgccatgctgaacaggaccccctgtgtcgtcctggaagggtcagggagacttgcggac
gtcctcgcccatgtggctggtctccccgttaccaaggttaccctgtctgtcgtccaccag
ctaatgaaacggttcttcggtctggagtatgaatccttcacagagctcaagatcatagaa
tggaccaagaagattcaggacatcatcaggatgcctcagctactgacagtgttccgtatg
agtgaagacaaccacggtgatgttgatgtggccattctccaggcgctgctcaaagccaac
aggagcagtgagtctgttgggatggagcgctgggagagacaactggagctagccgtagcc
tggaacagagtggacatcgctaagactgacatcttcactgaggatagccagtggaagtcc
agtgacctgcatcaggccatgttctcagccctgctgggccacaagccgcaatttgtccgg
ctgctcctggagaacggagtgtgtctgagagagttcctgggggaccagaccactctgtgt
gacctctacacccagctgcccacttcctgcttcttcccacgccgcctagccaagcgcatc
cagaccgagaagagtcgacgtagtcagaccctgagtcctcggggtgctgcagggaggacc
atctctctcagtcacgtctcggatgagatacgccacctactgggcagtttcacccagccc
ctctaccccctgcctggcctgcactccaccaggtacccaaaggagcccaaggaggatgtc
gctgtcacactgccacctaaagagcagctggagctccaggcctcgccagacccagacaga
ggaccagggagagattcagaaaggggagaggagactttcagagacccaggcagagacctt
ttcctctgggccatcctacagaaccagaaagagctggctgagatcgcctgggagcagtcc
cgggactgtacgtcagcagctctggccgctagtaagatcctgaagaagctggctgaggaa
ggagcggaagaggaggatgaggcggaggagatgagagaactggccaaacactatgagaga
cacgccatcggtgtgttcaataagtgccactgctgtgatgaggagcgtgcccagaggctg
ctaatccggatctcttcatcctggggtcaaaccacttgtctgaggctggctctggaggct
gatgacaagagctttgttgctcactctggggttcaggctctcctgacccagatctggtgt
ggggagctggcggcggacaatcctctgtggagggtgctgctatgtatgctgttcttccct
ctcatttacactggcttcctgggattcaggcgtgatgagtccatccagagagaggcagag
aggagtgctgagctgctcaccatggagtcattaacaggaagccaggcctgcaccaggagg
aagtatcctgtacatgacctccctgccaggaaccctctgggtctgaagccgttgacagtc
tccacccggctggtcagcctcttcacctctcctcaggtgaagttctactggaacatcttg
tcctacttcagcttcctgctgctgttttctgtggtgctgatgatcgacttccagaccacg
ccctcctggagggaggggcttctctatgtctggctcatctcattgatctgtgaggaggtc
cgacagctgttccatgacccagatgggtttgggttccgtaagaaggctgatatgtacatt
aatgacatgtggaacattctagactttctgtccatactgctcttcatcatcggcctggcc
ttcagactgaccaccaggttgttctatgcagggaaggtcatcctgtgtatcgacttcatc
atcttctgtcttcgtctcatggccatattcatcatcagtaaaactctgggccccaagatc
atcatcgtcaggagaatgatgttggacatgttcttcttcatgttcctgctgagtatctgg
gtggtagcatacggcgttgctaagcagggcatcctcatccacaacgaggacagactggac
tggatcgtccggggcgtcatctacgaaccataccttatcatcttcgggaatatgccctct
aacatcgacaatgccctgtttgacatcaaggcctgcagtgtaaatggtacagagtctcaa
aagcctaaatgtcctattcttaacgaggacaagatgcctgccttccctgagtggctgact
ataatcctactgtgtgtctacctgctgtttgccaacatactgctgctcaacctgctcata
gcaatcttcaactatactttccaagaggttcaggataacacagacaccatctggaaattc
cagcggtatgaactgatcaaggagtaccacagccgacccgctgccccccctccactcatc
ctcctatcccacatcttcctcttcatcagacgcatagtgctgcagagaccccccaatagt
tacagagccttcaaggagaggctgcctgaggtggaggaggaagagttattgtcgtgggaa
tcctttatgaaggataactaccttctctcctgcagacagcagcagagccagagcatggag
caacgtaccgcagacaccgctaacaaggtttgcaccataacagagctgctacagagggag
gaggccacagggtcggttgctttagtgaagagattgaccagactggaggagcaggtctct
cagtcagccagagctctccagtggatcatggacaccctcaaagctcagggtctacactct
aaagaggaggctccacagctggcctcacctggtaagctgaagaggtctgaaagtgaaccc
aatgaaccccatagacaagagaagacagagagagagaagacgttttaccatgtcaacgcc
cggcgtctggactaccctgacagtaccatccctcgcttccctgttcttgaggagaaggtg
ccctgggaggttgacttcatcctttacaatcctcctgttctgaatggagacagccaggat
cagacagatggatcagaacctgattctgtaaagcgttacagaaacccaggaggcaggaca
ggcatgaaaggaagaggagcactgacctgtctgggtccaaacctgatcctggaccctgtc
ctcacacggtacgaggctccacagatagataacagcttattatgcattccaaatgtgtac
tctgttgttgttgatctactgagagctctgctctaa
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integrated database retrieval system
