Oncorhynchus nerka (sockeye salmon): 115123394
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Entry
115123394 CDS
T07952
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00514
Other types of O-glycan biosynthesis
one04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
115123394
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115123394
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115123394
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
115123394
Glycosyltransferases [BR:
one01003
]
Glycan extension
O-Glycan
115123394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
115123394
NCBI-ProteinID:
XP_029508591
LinkDB
All DBs
Position
Unknown
AA seq
217 aa
AA seq
DB search
MHVSSMGVSKLCFLFSLALCALLLLIPTLQPSQHQGDRPRPRAHNKPARHPGRLVVPLQT
DMGKVTVGRNGIDGDSMGQSTPRETKRTVDGDWVYTARQTDTQGAGKHIDSQTGSEGDFL
HRTGGVTGAGGSRRRNPLELKDIFIAVKTTRKYHKSRLDLLFQTWVSKAKEQVGGNTRRH
THTFCPQGRFVLYCYQVLQDTFLSFSLLKYHIEHVIN
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtttcctcaatgggtgtcagcaagctctgcttcctgttctccctggctctctgt
gccctgttgctcctcatccccaccctccagccctcacagcatcagggggaccggccccgg
ccccgggcccacaacaagcctgcccggcaccctggacgtctggtggttcctctccagaca
gatatggggaaagtgacagtggggcgtaatgggattgatggtgactctatggggcagagt
acaccaagagagaccaagaggactgtggatggggactgggtgtatacagctcgtcaaact
gacacccagggcgctgggaagcatatagactctcagacagggtcagagggggacttcctc
cacagaactgggggtgtgacgggggctggagggtctcggcgcaggaaccctctggagctg
aaagacattttcatagcggtgaagaccaccaggaagtaccacaagtccagattggatctg
ctgttccagacctgggtgtccaaagccaaagaacaggtaggggggaacacacgtaggcat
acacacacattttgtccacagggtagatttgtcttgtactgttaccaagtcctccaggac
acctttctctctttctctctcttaaaatatcatatagaacatgtcattaattaa
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