Oncorhynchus nerka (sockeye salmon): 115125336
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Entry
115125336 CDS
T07952
Symbol
cplane1
Name
(RefSeq) LOW QUALITY PROTEIN: ciliogenesis and planar polarity effector 1
KO
K22859
protein JBTS17
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115125336 (cplane1)
Cilium and associated proteins [BR:
one03037
]
Primary cilia and associated proteins
Ciliogenesis and planar polarity effectors (CPLANE) complex
115125336 (cplane1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Joubert
Motif
Other DBs
NCBI-GeneID:
115125336
NCBI-ProteinID:
XP_029510705
LinkDB
All DBs
Position
LG4:26575529..26611629
Genome browser
AA seq
3301 aa
AA seq
DB search
MELKLEVVLSSSIKRKKPWPRFCWLGLEKESVFLLDDKRISEINMVSGHTKKKTPKLQPL
LPRVVTMAASQNGVWLAGLLVSGEMFLWSRDKDFLKTVAAVPTEAQLVTAAQGSGVCLSL
VVSGDGMRVLLLTVTGQVFLWECVHARDLAGVRDGTARGRWAQIQHPGNTALPSPKDKEA
SQHSIFVRGEAVGDICLSAFVFTSEVELSVTFLKIQWEEGQRSSPVGYSVRWVTKTYPMS
CLTPPCRPVRSRGSLVPAFSPDGLLLAVVLNQRDPRATQVLFVSTQNFVIVSSGLGGCGS
KKLVIPSKYVRSYWVGSVSWAAEGLYLACVLKRGSFLMLARLGGLLSLSTSGCSVDFGPA
HFLPLHPLVTYRPPVSVGGAGVDPLSSSSLSVRDVLRQRYSVTWHPRLPYLIVSDGYMAT
VLRVPEQPSPATLLRALLHDTSQGLECASRALERTQPHARAWLESVSCLNPSSSLQELRA
RPTPVPTPTATATSTLPLFLQDQGDLGDTRELIQRVQALFEDDSDLEGPPAGSHVEDHGR
LEFASMFDTLHALSDTLADLDPSSRPDPDASSADSERSPPALPPELRGVHGSLLTAWALG
VSLGGVMEQRERLLKYTVRCAVRFAALLRLISIPISHMGKRKNSTIPFSSRLLHLLRTLL
SFLPWGAPHTEGRSCLGLVVELIQQLVGLLLSSPPDLSQTGQASSEPSSQTLSTALLLLQ
LTSHSMDHTYSLQQKCAHTDVYCVLFLQEEGRGPSQQDLPLPQWPSSRLRGAWRAVYRHT
LQYWEELKYRRSGTDWKEEQGRVSVILSQIQTALQGMGERLEEGPTLLSYTGEQHFLFGS
YSESAQTWRAELWAERERDGPRSAFLETRLLLSLLYGLLFQYRLKEAQGLGDHMARLLLH
QAGPHGDDSAHNAEEALPGSWLPGEVHREAACAVVQTLGRFMASYFTNQPLLILPPHSVD
VPPPLHLPHAPGVGRLVPLCQEGVAGAVRGQQLSEVWTVGYALDLLLQGGLLPEATWLAH
RLGDWKTAVSLGLAYTTYSTEHCDFTGLRWRELHLPAALEPVSLFQGQLESLLGRKASSE
ETQGDEENYKSFTDSLEGEDMELLQGSVQEILKASVMAGVDVLSQPLGALLDSAKDLSSC
LPALVPMGLYLPAPPLYCPQPAPNTQDPSGGFGQLLEGASRHRVSGVLQRVLLLLRSARC
SRPAAQWYISHLRRSRHRLDKIRQKYSQQQCVTKAFPEALMKFVTRSGFFRLGPSGDGTM
DSVTIQTIICFRELCGLCWMLNVRDQLSMSCRKYQAARNHGRDPQVPADDSEVTATCEEA
LHWACRFLPFSRFLNAEEILQDTLLSLVSELPPVPLVAETLVQAFPEEEESVRVPLREKY
NSLLRRLRHCTVPASGQNGEKRDEEEGEEVMMILVQERLRQRRKDLKRLARHLAPLELYL
WEREEEQDRGEEGRAVALLERFSLGASLSNSTLTDCGRPLVYSDGDTAENSVALSPDLHS
KPPHSISKIVRVQDRADKPGSQVEVVEGGSTQEEDQSCTGPAQDPAVGEDSPSLTLPVVG
TWEFELEDAEYLRFLELFLSYVLEKDVPDPDAGCDPPLLKGFCSQLRERELHSLTFDVLT
TLRRRQRDGRQATRRQGGSDAPVFRAGHCYKPVLVTTPLFLHSEPPTPRPSMSVSVLSLP
GLRTGRQQGLFGFSLQARSASPAPEPAPQRSRLGSKSSPGQSSVPWEQPSEGWAFGPLCS
VEAVELQQELEPKLEAQFPGLGRLLEWMVRWADKRVLLGQPSRMKEREAGGGEVAGGGVV
IRVKASAPAVLTALSMLEHRYTAALLGMDHYSANLQVPERQWTVAPVLQPEVGWKLERES
SVDTGYPASAGTPITLPDQDPQHCELSYGSQTEGVERVTSQETSQLSDPVGVNLNPESGV
ADFPDNKCDLSAEKGEESNADEALRSSASLAILNISVHIKSLRPTLSPPGQALTLADLRC
SEREEDIVSSQEEEAENLLSHGSLRRPSDITEEVTRNITLSEGSGSDGPPNASFQPLPGA
GPQAGAQAADSAPNGGLPQESTNTTPAPASTPNQTLPAQTDPVRQLLQDELFKLVQLQQI
NFMSLMQVVGASFVNLPVLQNNTLPAQSNVPYPHPNTPLSHPNTLLPHLNLTPSQNNMSP
MPQTQSSVQAPLASEPLSGGHRRADKPPIHEMQPLAVHPEPLRDIQGQTRTLISSSHGLQ
TTVDPTCSAPLLLPFGGSSQVTAPYSSGLKLLQLHPPLLSLQRHGKTAPVREAWGPPSER
RPSTAVPPHLNPSQYDPAALRRAEERSREAERESTAPPSHLNLTQYAHYPSNQAPRNTLP
PLQNPETRVERSRGTEPRHLPPTLPSHRSPPVHGLPLLRFHPDPRPPTTFALIPLPHSSR
PMTVIPAAMGHNPRLQLLQRDPDPPRMMLPEATPPARVPHLIPLGELMGWAAGRQRGAEA
RLQLLRVDPQAQNPTPATPSTSTNSSRRQKRRVERLRREGEKAEVTFRPEDSIILPLECN
EDEPAEPVLGEGYVFPLGTFDSVLTGQVLVDKALSTAAELHAFASTHKRPPESHDACTNT
DPASPHSDTGISAQPTVTSAASGPAALPPELFLNLRFPRDPPVHDTETSGEKPERNTGHQ
FINVIDLEDGALLQELPSCPRPAVQDHDVTPSQPSPPTSAQLHLLAASVTNSAPSELTAD
TSTEDDQPQAQPSGLSQCFSVASLPPAHPEPSGDPVTRSLLQERRAPGRSLETHRGAPSR
APVIQVAARLSEMDAQLAALQNIADHMEREFANTRLLVRTIETLGPAMAPERVEGRTPVN
KTVTLAVSPEGWRSRLSVHHDPELAGLRQEEEEQEEGPDSVVVSSAPWVVKQPSSLSPHA
HAVQRTSTLHQPTPTGLWLSPVRPEPEQRVWEMGQDLTDTMDGAPGTWAEETLGLSGLSD
VADILTELVRGGGISPTALGLSHTQAARLNSRLDQQQSGKARQRGMRAEEERRELRVWMR
RKQREKLVEYRRQREEKRERERKPFSAPVTLKPTSKDININKKIKEEKDKTVLLEHHNQR
ARDACSLITDLLTTPLTLPTNAKCTLNLPSTSSRPSSTRPLTAQTVGSTRSSPRGRSLSV
GGRRRTSTKLQTGRARSLSSPGVTPRSERRPASSGGQETLTSRLGLHRPASFLPGDRLSH
VTRRGMITDLRGRTGTGPMTPSQQEWRREVIQSSSGWRGGGAREQRETEEREEEVVSPWN
PPPEICRLLGLENSEGQGGVVARAGGAGLDRLDTLSESTGSILSKLDWAAIESIVASEGA
I
NT seq
9906 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaagctggaggttgtgttgtcatcgagcatcaaacggaagaaaccatggcca
cggttctgttggctcggattggagaaggagtctgttttcctgctagatgacaagcggatc
agtgagatcaacatggtgtctggacacaccaagaagaagacccccaagctgcagcccctg
ctccccagggtggtaaccatggccgcatcccagaacggtgtgtggcttgccggattgctg
gtctcaggagagatgtttctatggagcagggacaaagacttcttgaagaccgtggcagca
gtcccgacagaagctcagctcgtcactgcagcacaagggtctggcgtgtgcctgtctctg
gtagtttcaggggatgggatgcgggtgctgctgttgactgtgacagggcaggtgttcctg
tgggagtgtgtgcacgcgcgtgacctggcaggggtacgggatggtactgctagaggacgc
tgggcacagatacagcaccctggaaacactgctctgccatccccaaaggacaaggaggct
tctcaacacagcatcttcgtcagaggggaggcagtgggcgatatctgcttgtcagctttt
gttttcacctcggaggtggagctaagtgtcactttcctaaagatccaatgggaggagggt
cagaggagcagtcctgtggggtacagtgtacgctgggtcactaagacataccccatgtcc
tgcctcacaccaccctgtcgtccggtgaggtccagggggtcactggtaccagccttctcc
cctgatggcctgctgttagctgtagtcctgaaccaaagagacccaagggctacgcaggtt
ctctttgtcagcactcagaactttgtgattgtctccagtggactgggggggtgtggcagc
aagaaactcgtcattccttctaaatacgtgaggtcgtactgggtgggcagtgtgagctgg
gctgcggaagggctctacctggcctgtgtgctgaagaggggctccttcctcatgctggct
cgtctgggggggctgctctctctgtctacctcagggtgcagtgtggactttggccctgct
cacttcctgcccctgcatccactagtcacttacagacctccagtctctgtcggaggggct
ggggttgaccctctgtccagctccagcctgtctgtacgggatgtcctgagacagcgctac
tcggtgacctggcacccgcggctgccctacctcattgtgtctgatggctacatggccaca
gtgctgcgggtccctgagcagccctcccccgccaccctcctcagggctctgctgcacgac
accagccagggcctggagtgtgccagccgggcactggagcgaacacagccccatgccagg
gcgtggctggagtccgtatcctgtctgaatcctagtagcagtctgcaggagctgagagcc
aggcccacacctgtacctaccccaacagccacagctacatccaccctgcccctcttcctg
caggaccagggagacctgggggacaccagggagctgatccagagagttcaggctttgttt
gaggatgactctgatcttgaaggaccgcccgctggttcacatgtggaggaccacggtcgg
ctggagtttgcctccatgttcgacaccctccatgccctctcagacaccctggctgatctt
gaccccagttctcgccctgaccctgatgctagctctgcggactcagagaggagtccccca
gccctccctcctgagctccggggggtccacggcagcttgctgacagcttgggctctgggt
gtgtcattaggtggcgttatggagcagagagagcgtctgctgaagtacacagtccgctgt
gcggtccgcttcgctgctctcctccgtctaatttccatccccatctcccacatgggaaag
agaaagaacagcaccattcccttctcctcccgcctcctccacctcctcagaacccttctc
tctttcctcccctggggtgcccctcacacagaggggaggagttgcctgggtttggttgtg
gagctaattcaacagctagtgggcctgctcctctcctcgccccctgacctctctcagact
ggccaggctagctctgagccctcctcccagaccctgtccacagctctgctcctcctgcag
ctgacctcccacagtatggaccacacctacagcctccagcagaaatgtgcccacacagat
gtctactgtgtgctattcctgcaggaggagggaagagggccatcacaacaggatctgcct
ctcccccagtggccctctagcagattgcggggagcgtggcgtgcagtatacaggcacacc
ctgcagtactgggaggagctgaagtaccgaaggagtggtacggactggaaggaggagcag
ggccgtgtgtctgtcatcctgtcccagatccagacagctctacaggggatgggagaaagg
ctggaggaagggcccactctgctgagctacacaggggaacagcacttcctgtttggttcc
tactcagagagtgctcagacttggagagctgagctgtgggcagagagagagagagatggg
cctcggagtgcgttcttggagacacgtctgttgctgtccctgctgtatggactgctgttc
cagtaccgtctgaaagaggcccaggggctgggggaccacatggcccgtctgctactccat
caggctggaccacatggggacgatagtgcccacaacgctgaggaggctcttcctggctcc
tggctgcctggagaggtccacagggaggcagcctgtgctgtagttcagactctgggaagg
ttcatggcctcatatttcaccaaccagccccttctcatcctgccccctcacagtgtggat
gtaccgcctcccttacacctcccccatgccccaggtgtagggcgcctggtgcccctgtgt
caggagggtgtggcgggggcggtgcggggtcagcagctgtcagaggtgtggacggtgggc
tatgccctggacctgctgctacagggggggctgttgccggaggccacctggctggctcat
cgtctgggggactggaagactgcagtctccctgggcctggcctacaccacctactccaca
gagcactgcgacttcaccgggctcaggtggcgagaactacatctcccagcagcccttgag
cctgtgagcctctttcaaggtcagctggagtctctactgggcaggaaggccagttcagag
gagacgcaaggagacgaggagaactacaagagcttcacagactctctggaaggtgaggac
atggagttgttgcagggttccgtgcaggagatcctgaaggcatcagtcatggctggggta
gatgtgttgtctcagcccctgggggctctactggactcagccaaagacctgtcctcctgc
cttcctgctctggtgcctatgggcctgtacctgcctgcgccgccactctactgcccccag
cctgcacccaacacacaggatccgtcagggggatttgggcagctgttggagggggcgtcc
cgtcacagggtgtcaggggtcctccagagggtgctgctgctcctgaggtctgcccgctgc
tcccgtccagctgcccagtggtacatcagccacctgcgacgctcccgacatcgcctagac
aagatccgtcagaagtactcccagcagcagtgtgtgaccaaggccttcccagaggctctg
atgaagtttgtgacccgcagtggattcttcagactgggacccagtggggacggaaccatg
gactctgtcactatacaaactatcatctgcttcagggagctgtgtggcctgtgttggatg
ctgaatgtcagagaccagctctcaatgtcttgcaggaagtatcaggctgcaaggaaccat
gggagagatccccaggtcccagcagatgacagcgaggtgaccgcaacctgcgaggaggct
ctccactgggcctgtcgtttccttcccttctcccgattcctcaatgctgaggagatcctc
caggacaccctcctcagcttggtctctgaactaccccctgtacccctggtggcagagact
ctggtgcaggccttccctgaggaggaggagtcagtcagggtccctctgagagagaagtac
aactcactcctgcggagactgaggcactgcactgtcccagcctcaggacagaatggtgag
aagagggatgaggaggagggagaggaggtgatgatgattctggtgcaggagcggctcaga
cagaggaggaaggacctgaagcgtctggccaggcacctggctcccctggagctctaccta
tgggagagggaggaggagcaggacaggggggaggagggcagggctgtagccctgctggag
agattctccctgggggccagtctgagtaacagcaccctgacggactgtgggcgccccctg
gtgtacagcgatggagacacggccgagaattccgtggctctctctcctgacctgcacagc
aagcctcctcacagcatcagcaagatagtgagggtgcaggaccgagcagacaagcctgga
agtcaagtagaagtagttgagggtgggagcacccaggaggaagaccagagctgcacgggc
ccagcccaggaccctgctgtgggggaggacagcccctctctgaccctgcccgtggtgggg
acctgggagtttgagctggaggatgcagagtacctgcgtttcctggagctcttcctcagc
tacgtgttggagaaggacgttcctgacccagacgcaggctgtgaccctcccctgctgaag
ggcttctgtagccagctgagagagagggagctgcactccctcaccttcgatgtcctcacc
acgctccgccgccgccagagagatgggcgccaagcgaccaggaggcaggggggcagtgac
gcccccgtgttcagagcaggacactgctacaaaccagtactcgttaccacccctttgttt
ctccacagtgagccccctacacccagacccagcatgtctgtcagtgtcctgtcccttcct
gggctcaggactggcaggcagcaggggttgtttggcttcagtctgcaggccaggtcagcc
agcccagctccagaacccgcacctcaaagaagccgccttggctcgaagtcgagccccggt
cagagttctgttccctgggagcaaccatcggagggctgggcgttcgggcccctgtgctcc
gtagaggctgtagaactgcagcaggagctggagcccaagctggaggcccagttcccaggg
ctgggcaggctgttggagtggatggtgcgctgggctgataagagggtgttgttgggacaa
cccagccggatgaaggagagggaggcgggcggaggagaggtagctggaggtggggtggtt
attcgggtcaaagcctcggctcctgcggtgctcacggccctcagcatgttggagcacagg
tacaccgccgccctgctaggcatggaccactacagcgcaaacttacaggttccagagagg
cagtggacagtggctccagtgttgcagcctgaggtgggctggaagctggagagggagagc
agtgtggatacaggttaccctgcatcagctggcacacccattactctgccagaccaggat
ccccaacactgcgaactgtcctatggctcacagactgagggggtggaacgagtgacatcc
caagagacctcacagctttctgaccctgtgggagtgaacttaaaccctgagagtggggtg
gcagacttcccagacaacaagtgtgacctttctgctgaaaaaggagaggaaagcaatgct
gacgaggccttgaggtcgtcagcctctctcgccatcctcaacatctctgtccacatcaag
agcctccgtccaacactgagcccaccaggccaggcattaacgctggcagatctacggtgc
tcagagagggaagaggacattgtcagctctcaagaggaggaggcagagaatctgctgtcg
catggctccctgagaagaccatcagatattactgaagaagtgacaagaaatataactctg
agtgagggttcaggatcagacggccctcccaatgccagcttccaaccccttcccggggca
gggcctcaggctggggctcaggcagcagactctgcccctaacggcggactgccccaggag
agcaccaatacgacccctgcccctgcctctactcccaaccagaccctgcctgcccagaca
gaccctgtcagacagctcttgcaggatgagctattcaaactggtccagttgcagcagatc
aacttcatgagtttgatgcaggtggtcggagcgtcgtttgtcaacctcccagttttacag
aacaacacactcccggcccagtccaatgtgccctatccacaccccaatacgcctctgtcc
caccctaacactctcctccctcacctgaatctgaccccctcccagaacaacatgtcccct
atgcctcagacccagagctcggttcaggcccctcttgcctcggagcccctgtctggggga
cacagacgcgcagacaaaccccccatccacgaaatgcagccattggccgtccaccctgag
ccgttgagagatatccaggggcagaccaggacattgatctcatcctctcatgggcttcag
accactgtggaccccacctgcagtgcccctctgctactgccctttggtggtagttcacag
gttactgctccctacagctcaggactgaagctgcttcagctgcaccctcccctgctgtcc
ctccagcggcatggtaaaacggcccctgtacgtgaggcctggggacccccgtctgagagg
agacccagcactgccgtgcccccccacctgaaccccagccagtatgacccagccgctctg
aggagggcagaggagagatcgagggaggcagagagagagtccaccgcgccaccatcacac
ctcaatctgacacagtatgcccactatccctccaaccaggcccccaggaacacactgccc
ccgctccagaatccagagaccagggtggagaggtccagagggactgagccccgtcacctg
cctcctaccctcccatcccacagatctcccccggtccacggcctccccctcctccgcttc
caccctgacccacgcccccctacgaccttcgctctcatacccctcccacactcctccagg
cccatgactgtcatcccagcagccatgggccacaaccccagactacagctactccagagg
gacccagaccctcctaggatgatgctgcccgaagccacccctccggcccgcgtgccacat
ctcatccctctgggggagctgatgggctgggctgcagggagacagaggggggcagaggcc
agactccaactcctcagagtggacccacaggcacagaaccctacccctgcaacaccctcc
accagcaccaactccagcaggaggcagaagagacgagtggagaggttgaggagagaggga
gagaaagcagaggtcacatttagaccggaggactccatcatactcccgctagagtgcaat
gaggacgagcctgcagagcctgttcttggggagggctatgtcttccctcttgggacattt
gactccgtgctgactggtcaggtattggtggacaaggcactgtctactgcagctgagctc
catgcctttgcctctacacacaagaggcctcctgagagccacgatgcctgcaccaacaca
gacccagcttctcctcactcagatacaggcatttctgcccaacctactgtcacttctgct
gcttctggacctgctgctctccctcctgaattgttcctgaatctgcggttccctagagac
cctcctgtccacgacacagagacatcgggggagaaacccgagagaaacacgggtcatcag
ttcataaatgtgatagatctggaggatggggccctgctacaggagttgccatcgtgcccc
cgccctgcggtgcaggaccatgacgtcaccccgtctcagccctctccccccacctcagca
cagctccacctgctggcagcctccgtcaccaactcagccccttcggaactcactgcagac
accagcacagaggacgaccaaccccaagctcagccaagtggtctgagtcaatgcttctct
gtagcgtccctcccacctgcccaccctgagcccagtggagacccagtgactcgcagtctg
ctgcaggagaggagagccccaggccgctccctggagacccatcgcggagctccatccagg
gccccagtgatccaggtggctgcccgtctgtctgagatggacgcccagctagctgccttg
cagaacattgcagatcacatggagagagagtttgccaataccagactgctggtgagaacc
attgagactctgggtcctgccatggctcctgaaagggtggagggaagaacaccagtgaac
aagacagtgactctggccgtctcaccagaagggtggcgatcacgtctgtccgtgcaccat
gaccctgagctagcgggacttcgacaggaagaggaggagcaggaggaaggacctgatagt
gtcgtagtcagctctgctccttgggttgtgaaacagccctcctctctttctcctcacgct
catgctgtccagagaacctcgaccctgcaccagcccacacccacaggcctgtggttgtct
cccgtcagaccagaaccagagcagcgtgtgtgggaaatgggtcaagatttaacagacact
atggatggagcacctggaacatgggcagaggagactctgggtctcagtgggctgagtgat
gtggcagacatcttgacggagttggtgagggggggaggcatctcccccacggccctgggg
ctgtcgcacacccaagctgcccgcctcaacagcaggctggaccagcaacagagcggcaag
gcgagacagaggggcatgcgagcagaggaggagaggcgagagctgagggtttggatgaga
aggaaacagagggagaaactggtcgagtaccgcagacagagggaggagaagagggagagg
gaacgcaaacccttctcggccccagtcacactgaaaccaacgtccaaagatataaacatc
aataagaaaatcaaggaagagaaagacaagacggttctgctggagcaccacaatcagcgg
gcccgcgatgcctgtagtctgatcacagacctcctcaccaccccactgaccctgcccact
aacgccaaatgcaccctgaacctaccctccacctcctcacgaccctcttccacacgaccc
cttacagctcagactgtcggcagcacccgcagcagccccagaggtcgtagtctctctgtt
ggggggaggaggaggaccagtaccaaactccagactgggagagcccgctctctctcctct
ccaggggtgacaccacgttcagaaagaaggcctgcgtcatcaggagggcaggagacactg
acttccagattgggactgcacagaccagcgagttttctgccaggggatcgtctctcccac
gtgacccggcggggtatgatcacagacctgaggggcaggactgggactgggccgatgaca
cccagccagcaagagtggagaagagaagtgatccagtcgtcatctggatggagaggtgga
ggagcaagggaacagagagagactgaagagagggaggaggaggtggtgagcccatggaac
ccccctccagagatctgcaggttgctggggctggagaactcagagggccagggtggtgtg
gtggctagagctgggggagcagggctggacagacttgataccctgtcagagagcactggc
agcatcctcagcaaactggactgggctgccattgaaagcattgtggcctcggaaggggcc
atctga
DBGET
integrated database retrieval system
