Oncorhynchus nerka (sockeye salmon): 115125415
Help
Entry
115125415 CDS
T07952
Name
(RefSeq) telomerase-binding protein EST1A-like
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115125415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115125415
03032 DNA replication proteins [BR:
one03032
]
115125415
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
115125415
mRNA cycle factors
Common to processing body (P body) and stress granule
115125415
DNA replication proteins [BR:
one03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
115125415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
115125415
NCBI-ProteinID:
XP_029510786
LinkDB
All DBs
Position
Unknown
AA seq
756 aa
AA seq
DB search
MQRNRDRSERCRSNTNNHHHSSSSSKHNSKSNIRRPRNRTYSTSSASSGASLDGLGQGED
RREDRARRDRLGHREREGGGGQLPNRRRNTRDSSTDSLEERRRDGGEEYLSPLWRRGEEE
SRGGRGHRGGGRGGLLKVSQSDRQSGTSHATSGPSDDPQGRLRQGTLPRGKERGILILPA
HTDLSNLPTEPGPRLLFGGIRGGKEAGLGRGGRGGGTRRLWDPNNPDQKPALRLSQHASL
QQQQPMYLQTGGGYGALHFLDTDEEAAGSPPVRQGEHFYPQQEAAAMAFYKYQNSDNPYP
YNANPNARYPYPYHTMPTTPYQMHSSNGIYPAQFYGEYRGQGYQTGAGAGLTPEEVEQQA
RGELGRQLRAADSQELQLSNLLSRDRLSADGLDRMAQLRADLLTLYERVILTDIEFSDSQ
NLDQALWKNVFYQVIEHFRQLLKDPSGDSTLRITPMLLTLLDEGTLFFDALLQKLQTVFQ
FKLEDYMDGMAIRPRPLRKTVKYALISAQRCLICQGDIARYREQASDSANYGKARSWYLK
AQQIAPKNGRPYNQLALLAVYTADQMERRRKQESEGGSRGPGVRGGGRGEEGARVEIWVG
PIGQAGVPSSHRGGSESSRDSEQEGELGNLSPSDLNKRFTLSFLHAHGKLFTKVGMESFP
SVASRVLQEFTVLLQHSPSPLGSTRVLQIITINMFTIHNAQSRGGDSEVRSVLQEQTTAL
GLAMFSLLVHRCTELLRDTPAGTHTHTHTHTHTPNV
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgcagagaaacagagacaggagtgagaggtgcaggtctaacactaacaaccaccaccac
tcgtcatcttcctctaagcacaactccaagtcaaacatcagaagacccaggaatcgcacc
tacagcaccagttctgccagtagtggcgccagcctggacggactgggacaaggggaggat
cggagggaggacagggcccgacgagaccgactgggacacagggagagagagggaggagga
ggtcagctaccgaacaggaggagaaacactagagactcctcaacagactcactggaggag
aggaggagagatggaggagaggagtacttgagccccctgtggaggagaggggaggaggag
agcagagggggaagaggacacagaggaggagggagaggagggctcctgaaagtgtctcag
agcgacagacagtcaggtacctcccatgccacctcaggccccagcgatgacccccagggg
cgcctcaggcagggcactctgcctcgtggtaaggagaggggcattctcatcctcccagcc
cacactgacctctccaatttgccgacggagcccgggccaaggctcctgtttggtgggatt
cgaggaggaaaagaggcgggactagggagaggaggaaggggcggaggaacaaggcgactc
tgggatcccaacaaccccgaccagaaacccgctctccggctctcccagcatgcctctctc
cagcagcagcagcccatgtacctgcaaacgggcggaggttacggagcgctgcacttcctg
gatacggacgaggaggctgcagggagtcccccggtccgccagggggagcacttctacccc
cagcaggaggccgcagccatggccttctacaagtaccagaactctgacaacccttaccct
tacaacgccaaccctaatgcacgttacccgtacccctaccacactatgcctaccaccccc
taccagatgcactcctccaacggcatttacccagcccagttttacggggagtataggggc
caggggtaccagaccggggctggagcaggtctgacaccagaggaggtggagcagcaggcc
aggggagagctggggagacagctgagggctgcagacagccaggagttacaactcagcaac
ctcctatctagagacagactcagtgctgacggactggaccgcatggctcaactcagagct
gacctgttgaccctgtatgagcgagtgatcctaacagacatagagttcagtgacagtcag
aacctggaccaggctctatggaagaacgtgttctaccaggttatagagcacttcagacag
ctcctcaaagaccccagcggagactcaaccctgcgcatcacccccatgctgctcactctg
ctggacgaggggactctattctttgatgcactgctgcagaagcttcagacggtgtttcaa
tttaaactggaggattacatggacggcatggccatcagaccacgtccactacgcaagacg
gtgaagtatgctctgatcagtgcccagcggtgtttgatctgtcagggggacatcgcccgt
taccgagagcaagccagcgactctgctaactacggcaaggcccgcagctggtacctgaag
gcccagcagattgctcctaagaacggacgaccttacaaccagctggccctgctggctgtt
tacacggcggaccagatggagcggaggaggaagcaggagtcggagggggggtccaggggc
cccggggtccgaggaggaggacggggggaggagggggccagggtggagatctgggtcggc
cctattggacaagcaggggttccatcatcacaccgcgggggcagcgagtccagcagagac
tctgaacaggaaggagaactgggtaacctcagccctagtgatctcaataagaggtttaca
ctcagcttcctccacgctcacggaaaactcttcactaaagtgggtatggagtcgttccct
tcggtggccagtcgggttctccaggagttcacagtgctgctccaacacagtccctcccct
ctgggcagcacacgcgtgttgcagatcatcaccattaacatgttcacgatacacaacgct
cagagcagaggaggagacagtgaggtgagatctgtgttacaggaacagactacggctctg
ggcctggccatgttctctctgctggtccaccgctgcacagagctgctgagagacacaccc
gcaggtacacacacacacacgcacacacacacacacacgcctaatgtgtaa
DBGET
integrated database retrieval system
