Oncorhynchus nerka (sockeye salmon): 115125518
Help
Entry
115125518 CDS
T07952
Symbol
smpd1
Name
(RefSeq) sphingomyelin phosphodiesterase
KO
K12350
sphingomyelin phosphodiesterase [EC:
3.1.4.12
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00600
Sphingolipid metabolism
one01100
Metabolic pathways
one04142
Lysosome
one04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
115125518 (smpd1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
115125518 (smpd1)
09143 Cell growth and death
04217 Necroptosis
115125518 (smpd1)
Enzymes [BR:
one01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
115125518 (smpd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
ASMase_C
Motif
Other DBs
NCBI-GeneID:
115125518
NCBI-ProteinID:
XP_029510896
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MRFAPIPCAAGLLCCVLVLCSVRLGTSFPVQDEGKPGITFLEEVGRLRVGFNWRNLTCPV
CKVLFTILDVALLSDVNEERVARAVGEACIRLHLAEERVCRQITELFRDDFIRALQQSLL
WPSEACALLVGRSCGRFDIYAPWNVTLPRIPKPPVTPPAPPKPGAPQSRVLFLTDIHWDQ
EYAVGSSADCKDPLCCRNESGSPSWNQRAAGFWGSYSKCDLPLRTVENMLENAARTGPWD
WVYWTGDIPAHNIWSQTRKQQLSELTVITRLIHSHLGNLKVYPAIGNHESTPVNSFPPPF
VHGNRSSRWLYDTMAEEWAPWLPEQALKTLRHGGFYTVEVQPGLRVVSLNMNFCARENYW
LMVNSTDPANQLQWLIHILQDSEEKGERVHIIGHIPPGLCLSSWSWNYYHIINRYEGTVT
GQFFGHTHMDEFQMFYDEATMTRAVGVAFIAPSITTYVNLNPGYRVYLVDGNYKGSSRFV
LDHETYILNLTEANRQPEGGVSSLLPTTSQHAVFHPDPNPKWTLLYRASEAYGVSSLFPA
DWDGLIRTFLQDDRVFQRFWYLRHKGHVSEPCIDACKTTVVCFLRSGRYDELEQCDLLEF
GGDMVSAVRKTLC
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttcgcacctatcccctgcgccgcgggtttgctgtgttgtgttctggtgttgtgc
tccgtacggttggggacctcgttccccgtgcaggacgaggggaaaccgggaataacgttt
ctggaagaggtcgggcgtctccgggtcgggttcaactggcggaacctgacctgtccggtg
tgcaaagtcctcttcaccatcctggatgtcgctctgctgagtgacgttaatgaggaacgt
gtggcgcgggctgtgggtgaggcctgtatccgtctccacctggctgaagagcgggtctgt
cgtcaaatcacagagctgttcagagatgacttcatcagggccttgcaacagtctctgttg
tggccgtcagaggcctgtgctctgctggttgggaggtcatgcggacgcttcgatatctat
gctccctggaacgtaaccctaccccggatccccaaacccccagtcaccccgcccgcaccc
cccaagcctggagcaccacagagcagggtcctcttcctcacagacatacactgggatcag
gagtatgcagtgggcagctctgctgactgtaaggacccgctgtgctgtcgtaatgagtct
ggatctcccagctggaatcagagagcggctgggttctggggctcctacagtaaatgtgac
ctgcccctgagaactgtggagaacatgttggagaacgcagcgcgaaccggaccgtgggac
tgggtctactggacaggagacatacctgctcataacatctggtctcaaaccaggaagcag
caactgtctgaactcaccgtaatcaccagactgatacacagtcacctaggtaacttgaag
gtgtacccggcgatcggtaatcatgagagcaccccggtcaacagtttccccccgccgttc
gtccatggcaaccggtcgtcacgctggctctatgacaccatggccgaggagtgggcgcca
tggttaccagaacaggccctgaagactcttaggcatggtgggttctacacggtagaggtc
cagccaggtcttcgagtggtgtctctgaacatgaacttctgtgccagggaaaattactgg
ctgatggtcaactctactgaccctgctaaccagctccagtggctgatccacatactacag
gacagtgaagagaagggagagagggtccacatcatcggtcacatcccccctggtctctgt
ttgagcagctggagttggaactactaccacatcatcaaccggtatgagggtacggtcact
ggtcagttcttcggccacacgcacatggatgagtttcagatgttttatgatgaggcgacg
atgactagggctgtgggcgtggccttcatcgctccctccatcaccacctatgtcaacctc
aacccaggttaccgggtctacctggtcgacggtaactacaagggcagttcccggtttgtt
ctggaccacgagacgtatatcttaaaccttacagaggctaaccgacagcctgaagggggg
gtctcctccctgctccccaccacctcacaacacgccgtcttccaccctgacccaaacccc
aaatggaccctcctctaccgtgcttcggaagcctacggcgtctcatccctgttcccggcg
gactgggacgggctgatcaggaccttcctccaggacgaccgtgtgtttcagcggttctgg
tacctcagacataaaggccatgtgtcagagccctgtatagacgcctgtaagacaaccgtt
gtctgtttcctacgttccggcagatatgacgagctggagcagtgtgacctgttggagttc
gggggagatatggtttcagctgttaggaagacactgtgttga
DBGET
integrated database retrieval system