Oncorhynchus nerka (sockeye salmon): 115128292
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Entry
115128292 CDS
T07952
Name
(RefSeq) exostosin-1b
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
115128292
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115128292
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
115128292
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
115128292
Glycosyltransferases [BR:
one01003
]
Glycan extension
O-Glycan
115128292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
115128292
NCBI-ProteinID:
XP_029513867
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All DBs
Position
LG4:complement(41821908..41938331)
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AA seq
740 aa
AA seq
DB search
MQAKKRYLFLLSAGACLVLLFYFGGVQLPASGRNRHDRSHNGYRPDQPWPHFSDPLQQFL
PWDQLDTEEYNIHISPRQKRDVNTSVYKGKRCRMDSCFDFSACKKNDFKVYVYPQQKGEK
ISESYQNILSTIEGSRFYTTDPGQACLFILSLDTLDRDSLSPQYVHNLKTKVQNLHLWNN
GRNHLIFNLYSGTWPDYTEDLGFDIGQAMLAKASISTENFRPNFDVSIPLFSKEHPRTGG
DRGYLKYNSIPPFRKYMLVFKGKRYLTGIGSDTRNALYHVHNQEDVVLLTTCKHGKDWQK
HKDARCDKDNAEYDKYDYREMLHNSTFCLVPRGRRLGSFRFLEALQAACVPVMLSNGWEL
PFSEIINWNTAAVIGDERLLLQIPSTVRSIHQDKILALRQQTQFLWEAYFSSMEKIVLTT
LEIIQDRVLQQESRSTLMWNSHPGGLFALPQYSAHLGDFPFYYATLGIKPYPKFTAVIHA
VTPLVSQSQPILKLLVAVAKSPYCAQIIVLWNCDKPLPAKHRWPATSVPVIVIEGENKVM
SSRFLPYETIVTDAVLSLDEDTVLSTTEVDFAFTVWQSFPERLVGYPARSHFWDSNKERW
GYTSKWTNDYSMVLTGAAIYHRYYHFLYTNFLPASLKGMVDQLANCEDILMNFLVSAVTK
LPPIKVTQKKQYKETMMGQSSRASRWADPDHFAQRQTCMNKFASWFGGMPLVHSQMRLDP
VLFKDQVSILRKKYRDIERL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaaaaaacgatatttattcctgctctccgccggtgcatgtctagttctactg
ttctactttggaggggtacaacttccagcgtcgggcagaaaccggcatgaccgtagccac
aatggatatcgccccgaccagccgtggccacacttctctgacccattacaacagttccta
ccttgggatcaactggacactgaggagtacaacattcacatatcaccgaggcagaagagg
gacgttaatacaagcgtgtacaaaggcaaaagatgtcgcatggattcgtgctttgatttc
tctgcatgtaaaaagaacgatttcaaagtgtatgtctacccccagcagaagggggagaaa
atctcagaaagttaccagaatattttatcgaccattgagggatccaggttctacaccact
gacccgggacaagcttgtctattcatcctgagcttggacaccctggaccgggactcgctc
tcgccacagtacgtgcacaatctcaaaaccaaggtccagaaccttcatctttggaacaac
ggcaggaaccatctcatatttaacttgtactctgggacatggccggactacacggaagac
ctaggtttcgacataggccaggccatgttggccaaggccagcatcagtaccgagaatttc
aggcccaactttgacgtgtccatcccgctgttctccaaggagcaccctaggaccggaggg
gacagggggtacctaaagtacaactccattccacctttcaggaaatacatgctggtgttt
aaggggaaacgataccttacaggtatagggtcagacacgaggaatgccttatatcatgtc
cataatcaggaggacgtggtgctcctcaccacctgcaaacacggcaaggattggcagaaa
cacaaggacgcacgctgcgacaaggacaatgcagaatatgacaaatatgactacagagag
atgctgcacaactccactttctgcctggtgcctcggggcagacgcctgggatcctttcgc
ttcctggaggcactgcaagcagcctgtgtgcctgtgatgctgagtaacggttgggagctg
cccttctctgagatcatcaactggaacacggcggccgtcatcggggacgagaggctcctg
ctgcagatcccgtccacggtgcgctccatccatcaggataagatcctagctctgaggcag
cagacccagttcctgtgggaggcctacttctcctccatggagaagattgtgctgactact
ctggagatcatccaggaccgggtgctgcagcaggagtccaggagcaccttgatgtggaac
agccaccccggggggctcttcgccctgccacagtactctgcccacctgggagacttcccc
ttctactacgccaccctaggtataaaaccgtaccccaagttcacggctgtcatccatgca
gtcacccccctggtctcccaatcccagcccatcctcaagctgttggtggctgttgccaaa
tcaccgtattgtgcacagatcattgtgctgtggaactgtgacaagcctctccctgctaag
caccgctggcctgcaacctccgtgcccgtcattgtcatcgagggagaaaacaaggtgatg
agcagtcgcttcctgccctacgagaccattgtcaccgacgccgtgctcagcctggatgag
gacactgtactctcaaccacagaggtggactttgccttcacggtgtggcagagcttccca
gagaggttggtgggctacccggcccggagccacttctgggacagcaacaaagagcgctgg
ggctacacttccaagtggaccaacgactactccatggtgctgaccggagctgccatttac
cacagatattaccacttcctgtacaccaatttcctgccagccagcctgaagggcatggtg
gaccagctggctaactgtgaggacatcctcatgaacttcctggtgtcagccgtcaccaag
ctgccgcccatcaaggtcacccagaagaagcagtacaaagagaccatgatgggacagtcg
tcgcgggcgtcacgctgggctgacccggaccacttcgcccagcggcagacgtgcatgaac
aagttcgccagctggtttggcggcatgcccctggtccactcccaaatgaggctggacccg
gtgctgttcaaggaccaggtctccatcctgcgcaaaaaatacagggacatcgagaggctc
tga
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