Oncorhynchus nerka (sockeye salmon): 115128346
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Entry
115128346 CDS
T07952
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115128346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115128346
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
115128346
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
DUF5001
Motif
Other DBs
NCBI-GeneID:
115128346
NCBI-ProteinID:
XP_029513975
LinkDB
All DBs
Position
LG4:44406555..44416851
Genome browser
AA seq
973 aa
AA seq
DB search
MCAVIPLRRKGTNIKRRRSPPHNFMQNINNLIECTAISSCKRNCCILRRIEVERETKVAI
HRRPRDGDRWGPKPGLYQWNHSIRGELPPLSNELHVPVRETGCAGQELWALQALQRQPNA
AQYFQQLMLQQQINSAQLQNLAAVQQATLAASRQSSPPANSTSQTTSTTVTSVNVTTSGG
GAITSTRAIGPGSSATSTISQSVLLGGNAAGQGQMYLRVNRSLRSPLSSQLIFMPSSTAT
TAMATVTQQPQTQQQQQREDTPTSSSNQSDNDQVQNLALRCVSSPKGVGVKTETPERGEP
ATYSLVQSSHQQFNQSTPQSTTKPTQQQQSHIKIPTYIQSSNANLSSLNLKTGNHHSNTP
SSPSTSVPLSQLLLSGPNFGRGGAITTVTSAATATHILVPTSNAPAQSHSYQVAAATIKP
NVSTQTLVVQPLQKSTVNDKGGYGNGPVPIQPKTQQGLRMPLQLPSRNPPPILPAPPANN
QTSAAQPPPHIPVQIVGARQSSIGSPQALALVQARNTCSQDGATLLSSSSRASILTMVAS
ITSREGGVINRRTDLKSLQSAQETLPLAHISHVHAQANQNQRPGLKPSPNCTLASSNSSQ
SQAAISPPTLCHSSHTLPLPLVEASSTVVAANGESVCSQPPQGKSMKRKSESVAANDEDG
APPPHLVPMSEHSPALSSSATEAGSGPLSPSPSPSRSPALSMSRMGGGQGERAPPQQAVV
KPHVLTHLIEGFVIQEGAEPFPVSGPVKEPAGEDLAMDNLDSSQPETVTTATVLKCEYCK
SFAPARQFRGTKRFCSLTCSKRYNVSCSQHFRLRQGGHLSHSDEDGVLRRRVPHRTSSEI
ASAKIAGRPLPVKCRSESSQSEDVSSCGEDEDDPMSLSPASSSSCHQPPPTLRLEGSEAP
HFLPGSPAQWSVEEVSQFISSLQGCEELADHFLSQEIDGQALLLLREEHLMSTMNIKLGP
ALKICAHINNLRD
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgccgtcattcctttgcgccggaaagggacaaacatcaaaaggaggcgtagtcct
ccgcacaattttatgcaaaatatcaacaacctaattgaatgtactgcaatatcgtcgtgc
aaaaggaattgttgcatactgcgacgcattgaagtcgagagagaaacaaaagtggcaata
caccgacgtccacgtgatggagacagatggggaccaaaaccagggctctaccaatggaac
cactccatcaggggtgaactcccgcccctctccaatgaactccatgtccctgtacgagag
acaggctgtgcaggtcaggaactgtgggcccttcaggcgctgcagaggcagcccaacgca
gcgcagtacttccagcagctgatgctgcagcaacagatcaacagtgcccagctacaaaat
ctggctgcagtacaacaggccacccttgctgccagtcgtcagtccagccctcccgccaac
agcacctctcagaccacaagcaccacagtcacatctgtgaatgtaaccacttctgggggt
ggtgccataaccagcacccgcgctataggcccaggctcctccgcgacatccactataagc
caatcagtgctgctgggcggaaacgcggcaggacagggacagatgtatctgagagtgaac
cggtctctgaggtctcccctctcctcccagctcatctttatgcctagtagcacggcaacc
actgccatggcaacagtcacccagcagccgcagactcagcagcagcaacaacgggaagat
acacctacttcctccagcaaccaatcagacaatgaccaggtacagaacctggctctgcga
tgtgtcagcagtcccaagggggtcggggtcaagactgaaaccccagagaggggtgaacca
gcgacctactcccttgtccagtcatctcaccagcagttcaaccagtccactccacagtct
accactaaaccaacccaacagcaacagtcccacatcaagatccccacctacatccagagc
tccaacgccaacctgtcctctctcaacctcaagacgggcaaccaccactccaacaccccc
tcctcaccctccacctctgtcccactctcacagctcctcctctccggacccaactttggc
cggggcggggctatcaccacggttacctccgccgccacggcgacgcacattctggtgccc
acctccaatgcgcccgcccagtcccacagttaccaggtggctgctgccaccatcaagccc
aatgttagtactcaaacactggtggttcagcctctgcagaaaagcactgttaacgacaag
ggaggctacgggaacggtcccgttccaatccagcccaaaactcaacagggtctccgtatg
ccactgcaactgccatcccgcaacccgcctcccatcctccccgcaccccccgccaacaat
cagactagtgctgcccagcctccgccgcacatcccagtccagatagtaggagccaggcag
agctccataggaagcccccaggctttggccttggtccaggcccggaacacctgttcccag
gatggagctactcttctgagtagttccagcagagccagcattctcaccatggtggcctcc
atcacttccagagagggaggggtgataaaccgacggacggatttaaagagccttcaatca
gcccaggaaaccctcccattggcccacatctctcacgtgcatgcgcaagccaatcagaat
cagagacctgggctgaagccaagtccaaattgcaccttggccagcagcaactcctctcag
tcccaggcagccatctctcctcccaccctctgccattcctcccatactttacccctgcct
ttggttgaggcgagcagcaccgtagtggcagccaatggagagtctgtgtgttctcagcct
ccccagggtaagtcgatgaagaggaaatccgagtcagtcgcagccaatgacgaagatggt
gcccctcctccccaccttgttccaatgagtgaacactcccctgccctctcctcctccgcc
acggaagcaggctctggtccactttctccctccccctctccctctcgttcccctgctctc
tcgatgtcccgtatggggggtggccaaggggagagagccccccctcaacaggctgtggtc
aaaccccacgtcctcacccacctcatagagggcttcgtcatccaggagggagctgaacct
ttccctgtgagtgggccagtcaaggagccagctggagaagatttggccatggacaatcta
gactctagtcagcctgagactgtgactacagctacagtgctgaagtgtgagtactgcaaa
agcttcgccccagccagacagtttagagggaccaagcgcttctgctccttgacctgttcc
aagaggtataatgtgagctgcagccagcatttccgcctgcgacaggggggtcacctctcc
cactctgacgaggacggggtcctgaggaggagggtcccccacaggaccagctccgagatc
gccagtgccaaaatagccgggagacccttaccagttaagtgccgctccgagtccagccaa
tcggaggacgtctccagctgcggggaggacgaggacgatcccatgtccctctccccagcc
tcctcttcttcctgccaccagcctccgcccacactccgattggagggctcggaggcgccc
cacttcttgcccggcagccccgcccagtggagtgtggaggaagtgtctcagttcatatca
tctctgcaaggctgtgaggagctggcggaccatttcctgtcgcaggagattgacggacag
gccctgctgctactccgagaggagcatctcatgtccaccatgaacatcaagctcggtccc
gccctcaagatctgtgcccatatcaacaacctgagagactga
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