Oncorhynchus nerka (sockeye salmon): 115128501
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Entry
115128501 CDS
T07952
Name
(RefSeq) tropomyosin alpha-3 chain isoform X1
KO
K09290
tropomyosin 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04260
Cardiac muscle contraction
one04261
Adrenergic signaling in cardiomyocytes
one04814
Motor proteins
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
115128501
04820 Cytoskeleton in muscle cells
115128501
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115128501
04261 Adrenergic signaling in cardiomyocytes
115128501
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115128501
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
115128501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
DUF3450
CENP-F_leu_zip
Lebercilin
DUF745
TMF_DNA_bd
PUMA_CC
XhlA
ATG16
SlyX
Crescentin
DUF16
Motif
Other DBs
NCBI-GeneID:
115128501
NCBI-ProteinID:
XP_029514242
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Position
LG4:49625279..49660215
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AA seq
284 aa
AA seq
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MEAVKKKMLMLKLDKENALDAAEQADTDKKAAEERSKQHEDELLQMQKKLKGTEDELDKY
SEALKDAQEKLEVADKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLLIIEGDHERTE
ERAELAEAKCAELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagtcaagaagaagatgcttatgttgaagctggataaggagaacgctctggac
gcggcagaacaggccgataccgacaagaaggcagccgaggagaggagcaagcagcatgag
gatgagttgctgcagatgcagaagaagctgaaggggactgaggatgagctggacaaatac
tctgaggccttgaaggatgcccaggagaagttggaggttgcggacaagaaggctgcagat
gctgaggctgaggttgcttccctgaaccggcgtatccagctggttgaggaggagttggac
agggcccaggagcgactggccactgctctgcagaaactggaggaggcagagaaggctgcg
gacgaaagtgagaggggcatgaaggtgattgagaaccgagccctgaaggatgaggaaaag
atggagctacaggagatccagctgaaagaggccaagcacattgctgaggaggccgatcgc
aaatacgaggaggtggctcgtaagctgctgatcatcgagggggatcacgagcgcacagag
gagagggcagagcttgctgaggctaaatgtgctgaactggaggaggagctgaaaaacgtc
accaataaccttaagtccctggaggcccaggcggagaagtactcccagaaggaggacaag
tatgaggaagagattaagatcctgactgacaagctcaaagaggctgagactcgtgctgag
tttgctgagaggtctgtggccaagctggaaaagaccatcgatgatctggaagatgagcta
tacgcacagaaactgaagtacaaggccattagtgaggagttggaccacgccctcaatgac
atgacttccatataa
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