Oncorhynchus nerka (sockeye salmon): 115129536
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Entry
115129536 CDS
T07952
Name
(RefSeq) sequestosome-1-like isoform X1
KO
K14381
sequestosome 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04137
Mitophagy - animal
one04140
Autophagy - animal
one04217
Necroptosis
one04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115129536
04137 Mitophagy - animal
115129536
09143 Cell growth and death
04217 Necroptosis
115129536
04218 Cellular senescence
115129536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115129536
03029 Mitochondrial biogenesis [BR:
one03029
]
115129536
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115129536
Membrane trafficking [BR:
one04131
]
Autophagy
Mitophagy
Cargo receptors
115129536
Pexophagy
115129536
Aggrephagy
115129536
Xenophagy
115129536
ER-phagy
ER-phagy recepters
115129536
Other autophagy associated proteins
Midbophagy
115129536
Mitochondrial biogenesis [BR:
one03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
115129536
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115129536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
115129536
NCBI-ProteinID:
XP_029515837
LinkDB
All DBs
Position
LG5:16366641..16370767
Genome browser
AA seq
469 aa
AA seq
DB search
MSMTVKAYLLGKEHMPKEIRRFAVDQDVSTSFEYLNRKVVDVFSTLRNVPYQMFYKDEDG
DMIAFSTDDELIMGLTCIKDDTFRLFIKEKKEHRREFPAFAFPGGVPPFAFPPHPGAPHM
GPPPPHGPPPHGHGPHGPPMVHPNVTCDECEGPVAGTRFKCTVCSNYDLCSPCQAKGLHK
EHVLLPIWHPFNNTFEWFPRGKWMRKMRHCMWAQAQSQAQPGPSGSQPGPSGSQPGQAAP
EDSQPSSDASSASSQQSQANMDYLKNIGEGVAAMLSPLGIDVDIDVEHEGKRTKVMTPNP
TPPGSGGHPGARSDNGTGWSEGAGANEGDMEVDELSSLGSASGLAKGGKDTGGSGDEEWT
HVTSKEVDPSTGELQSLRVGEEGSLEALGSLTPSQGPSQEPLKSLTLAEAAAYPHLPQDA
DPRLVESLSQMLSMGFTDEGGWLTRLLHTKDCDVGAALDTIHYSKPPQK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaccgtgaaagcctatctccttgggaaggaacacatgccgaaagaaattcgt
cgctttgccgtcgaccaagatgtttcaacgagttttgagtatttgaatcgaaaggttgtt
gatgttttctcaacactgcgaaatgtcccctaccaaatgttttacaaagacgaggacggt
gacatgatcgccttctccaccgacgatgagctcatcatgggcctcacctgcatcaaggac
gacaccttccgcctcttcatcaaggagaagaaggagcacaggcgtgagttccctgctttt
gctttcccgggcggtgtccctcctttcgccttcccccctcaccctggagcaccccatatg
gggccccctccaccccatggcccaccacctcatggtcatggccctcacgggccccccatg
gtgcaccccaacgtgacctgtgatgaatgcgagggcccggtggcagggacccgtttcaag
tgcactgtgtgctccaactacgacctatgctccccgtgccaggccaagggactccacaag
gaacacgtcctcctacccatctggcaccccttcaacaacacatttgagtggttccctcgt
gggaagtggatgcggaagatgagacactgcatgtgggctcaggcccaaagccaggcccag
cctggtccctctgggtcccagcctggtccctctgggtcccagccaggccaggcggccccc
gaggacagtcagccatcctctgatgcctcatctgcttcctcccagcagtcccaggccaat
atggattacctaaagaacattggagaaggggtggcagccatgcttagcccactgggtatc
gatgtggatattgacgtggagcacgaggggaagaggaccaaggtgatgacccccaacccg
accccacccgggtcaggaggccaccccggtgctaggagtgacaacgggacagggtggtct
gagggagcaggggcaaacgagggagacatggaggtggacgagctgagcagcctggggagc
gccagtggtttggctaagggtggtaaagacactgggggcagtggtgacgaggaatggact
cacgtgacctccaaggaggtggacccctctactggagagctccagtctctcagggtgggt
gaggagggctcactggaagccctagggtccctcaccccttcccagggtccctcacaggaa
ccactgaagtccctcactctcgctgaggccgcagcctacccccacttgcctcaagatgca
gacccacgcctggtggagtcgctgtcccagatgctgtccatgggcttcacagacgagggt
ggctggctcacccgtcttctccacaccaaggactgcgacgttggggctgccctggacacc
attcactactccaaacccccccagaagtaa
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