Oncorhynchus nerka (sockeye salmon): 115129810
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Entry
115129810 CDS
T07952
Name
(RefSeq) zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
115129810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115129810
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
115129810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
115129810
NCBI-ProteinID:
XP_029516408
LinkDB
All DBs
Position
LG1:35115832..35151327
Genome browser
AA seq
1483 aa
AA seq
DB search
FTKILFYFTVLHYSFKVFTLNNNVLVDGLFHSLFLSLTNSPPLFSLARPQGLASSPVISD
CISLIRLSPQAAGTGESPFSPPHPYINHHMEHYLRSMHSSPTLSMISAARGLSPAEVTHE
HLKERGLFSLPPPPPGANPTQYYHLMASGRSTYGDLLLQTGAAAAAAAAAAHLPDYISPV
DVSRFSSPRLTPRLNRKRALSISPLSDASIDLQTMIRTSPNSLVAYINNSRSSSAASSSY
GHLSVSGISPSFTFPHSINPMAYQQLFNQQRGLSAFGHTPPLIQPSPSFAARQHAHAIAA
SALNTTHNTSSSESNQNAGSDPAVSSTVNPMITKRHKVKTEAEGPRSISPCSQEHVLDLS
EERDKDEWKQEPEAFYETNCHWDGCTKEYDTQDQLVHHINNDHIHGEKKEFVCHWDECSR
EQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCCKAYSRLENLKTHLRSHTGEKPYVCEHEG
CNKAFSNASDRAKHQNRTHSNEKPYICKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQ
RGDVPPRGTPKGNGENEANAKQSDRGIDGKMEANSITRGVEDCLQVKSIKTENSMTYQSS
PGGHSSCSSEPSPLGSAHNNDNGVEMALHSGGSFGELSALDDAPMVDSSTLSHGNSAGVG
LGLRKGGGVTIKLENIKKERLKNVRDSCPWANSGPQIRNTNTKLPPIPAVGSLLENSNMI
ASPGPYPGQHLGDLSSCEVTMLNQLNEQGRRYSNTSTASSAYTSRRSSGISPCYSSRRSS
EASQFSNRHNNISSADSYDPISTDLSRRSSEASQCGGGGGNGPSLLSLTPAQHYHLKAKY
AAATGGAPPTPLPNMERMSLRTRMALYGDHSQERESSSNSNLFQPPAGAVPRRCSDIGYS
NHSMMPHEVPGNLPRRASDPVRRPTLDPLSLLRVQRYNSMNSMNPNSMMPPPSTDRRGLA
MQGYTRSDGSLHHHPFDPRPPSISENVVMETMAVDGLDHAGDEDMVLPDDVVQYLRSQNT
GAGQSAGPVDYTNSQSHGFQVQGNMTSSQQPQQQFYGQRRMAMVDTNMPLSESGQAPLTL
YKMSPGSGSQQQQYPTSPRMNNKNNMPVQWNEVSSGTMDATGTPRLTKQNLLRNNNLAVV
QQRQNCRPFQGSMGSNSQQVMPMSQNMELQGYTQSSNAQRINSVQQQQRQPCSMNYTEQM
SPQQGYGQDIVPIPNSGSGNGSLRPNYNGMALPNGRVMATHNPDIQNYRSRTQVESYPPH
MNQVELLTYSSTPQQQAVHTGTRDGMQPRLPMETKSMSRQHVRSSSTMQNRFLQSDFNHN
ASEASPKKPGRTAAFNVGQKGNSNSNAPMLYTGQIHMFESNNNLSFDSPISPCAPQALVG
TAVTMASPGVNQVTSTVDSSGVEHAQIDFDAMLDDGDHSSLMSGTLSPGLLTSLSQNSSR
LTTPRSSVTLASVPAGIGNMAIGDMNSMLTALAEESKFLNMMS
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
ttcacaaaaatcctgttttacttcacagttttgcattactctttcaaggtcttcacttta
aacaacaatgtgctggtcgatggtctctttcactctctatttctgtcattaactaattct
ccacctcttttctctctcgccagacctcaaggcctagccagcagcccagtcatctcagac
tgcatctctctgatccgtctgtcccctcaggcagcagggacaggggagtcccccttcagc
ccccctcacccctacatcaaccaccacatggagcactacctccgctccatgcacagcagc
cctaccctctccatgatctcagctgcccgtggactcagccccgcagaagtgacccatgag
cacctgaaggagcgtggtcttttcagcctgccccctccccctccaggggccaaccctaca
cagtactaccacctcatggccagtggcagaagcacctacggagacctcctcttgcagacc
ggggcggccgcggcagcagcagccgcagcagcacacctgcccgactacatcagccctgtg
gatgtgtccaggttctccagccccagactgacccccaggctgaacaggaagcgagccctg
tccatctcccctctctcagacgccagcatcgacctgcagaccatgatccgtacctcgccc
aactctctggtggcttacatcaacaactcacgctccagctctgcagccagcagctcctac
ggacacctgtcagtcagcggcatcagtccgtcgttcaccttcccccactccatcaacccc
atggcataccagcagctgttcaaccaacagagaggcctgagtgcgttcggccatacccct
cccctcatccagccctcgccctccttcgctgcccgccagcatgcccacgccattgcagcc
tctgccctcaacaccacccacaacacctccagctctgagtccaaccagaatgctggtagc
gacccggcggtgagcagcacagtcaaccccatgatcaccaagaggcacaaggtcaagaca
gaagcagagggtccccggtccatatcaccgtgctctcaggagcatgttctggacctgagt
gaggagcgggataaagatgagtggaagcaggagccagaggctttctacgagaccaactgt
cactgggacggctgcaccaaggagtacgacactcaggaccagctcgttcatcacatcaac
aacgaccacatccatggggagaagaaagagtttgtgtgccattgggatgagtgctcgaga
gaacagaagcccttcaaagctcagtacatgctggtggtccacatgaggagacacactggg
gagaagccacacaaatgcacatttgaaggatgctgtaaggcctactctcgcctggagaac
ctgaagacccacctgaggtcccacacaggggagaagccgtacgtctgtgaacatgagggc
tgcaacaaagccttctcaaacgcctcagacagagccaagcaccagaaccgcacacactcc
aatgagaaaccctacatctgtaagatccctgggtgcactaaacgctacacagaccccagc
tctctcaggaagcatgtgaagacggttcacggaccagaggcccacgtcaccaagaaacaa
cgtggcgatgtgcctcccaggggtactcccaagggaaatggagagaacgaggcaaatgcc
aaacagagtgatagagggatagatggaaagatggaggccaacagcattactagaggagtg
gaggactgcctgcaggtcaagtcaatcaagaccgagaactcgatgacgtatcaatccagc
cctggcggtcactcgtcatgtagcagtgagccatcgccacttggcagtgcccacaacaat
gacaatggagtagagatggccctgcacagcgggggaagctttggggagctgagtgcactg
gatgacgctcccatggtggactcctccaccctctcccatggcaactcagcaggggtgggg
cttgggctccgtaaagggggaggagtcaccatcaagctggagaacatcaagaaggagagg
ctgaagaatgtgagggattcgtgtccctgggccaactctggtccacagatccggaacacc
aacaccaagctgcctcctattcctgctgttggttcccttctggagaactccaatatgatc
gcttcacccgggccctaccctggtcagcatcttggtgacctgtcatcatgcgaggtgacc
atgctaaaccagctgaatgagcagggccgccggtacagcaacaccagcactgccagttca
gcctacaccagccgccgctcctcgggcatctccccctgctactccagccgccgctcttcc
gaagcttcgcagttcagcaaccgccacaacaacatcagttcagccgactcctacgacccc
atctccacagacctgtcccggagatccagcgaggccagccagtgtggagggggtggtgga
aacggccctagtttgctcagcctcaccccggctcagcactaccatcttaaggccaagtat
gctgccgcaaccgggggagctccacccacacctctgcccaacatggagcgcatgagcctc
aggaccaggatggccctgtacggggaccactcccaggagagggagagctcctccaattcc
aacctgttccagccccctgccggagcagtgcccagacgctgcagcgacattggctacagt
aaccatagtatgatgccccacgaggtccctggtaacctgccacggagagccagcgatccc
gtccgcagacctaccttggacccactgtccctgctcagggtccagcgctacaacagcatg
aacagtatgaaccccaactccatgatgcctcctccctctactgatcgccggggcctggcc
atgcagggctacacacgatccgacggaagtctgcaccaccaccctttcgacccgcggccc
cccagcatctcagagaatgtggtgatggagaccatggctgtggacggactggaccatgca
ggggacgaggacatggtgctgcctgatgatgtcgtacagtatctcaggtctcagaacact
ggcgccggccaatcagcaggccccgtcgactacaccaacagccaatcacacggcttccag
gtccaagggaatatgacctcctcccagcagccccagcagcagttctatgggcaaaggagg
atggccatggtggataccaacatgcccctgtctgagtcaggccaggccccactaacgctc
tacaagatgagccctggttctggatcacagcaacagcagtacccaacctcaccccgtatg
aacaacaaaaacaacatgccagtgcagtggaatgaggtcagctcagggactatggacgcc
acaggcaccccaagactcaccaagcagaacctcctcagaaacaacaacctggcagtggtt
cagcagagacagaactgtaggcctttccagggtagtatgggtagtaacagccagcaggtg
atgcctatgagccagaacatggagctacaaggctacactcaaagtagcaacgctcaaagg
atcaactctgtccaacagcaacagaggcagccatgcagcatgaattatactgagcagatg
agtccccagcagggatacggccaagacattgtccccatccctaactctggatctgggaat
ggcagcctacgaccaaactacaacggcatggcactgcccaatggcagagtaatggcaaca
cataatccagatattcaaaactacagatcaaggactcaggttgaaagctatccccctcac
atgaatcaggttgagctgctgacctacagtagtacgcctcagcagcaagccgtccatact
gggaccagagatgggatgcagcccaggcttcccatggagaccaagtctatgtccagacaa
catgtaagatccagcagtacgatgcagaaccgtttccttcagtctgacttcaatcacaac
gcctctgaggccagtccaaagaagccaggccgcaccgcagcatttaacgtcggacaaaag
ggaaactccaactctaacgctccaatgttatacactggccagatacacatgttcgagtcc
aacaacaacctgagttttgactcccccatatccccctgcgcaccccaggcactggtaggc
actgccgttaccatggcatccccaggggtcaaccaggtcaccagcaccgtggactcctct
ggtgtggagcacgcccagattgactttgatgccatgttggatgatggtgaccactccagc
ctgatgtcggggaccctcagccccgggctcctcacaagtctgtcccagaactcctccagg
ctcaccaccccccgtagctctgtgaccctggcctctgtgccagcagggatcggtaacatg
gccatcggcgatatgaactccatgttgaccgccctggctgaggagagtaagttcctcaac
atgatgagctaa
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integrated database retrieval system