KEGG   Oncorhynchus nerka (sockeye salmon): 115130705
Entry
115130705         CDS       T07952                                 
Name
(RefSeq) GTP-binding nuclear protein Ran
  KO
K07936  GTP-binding nuclear protein Ran
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03008  Ribosome biogenesis in eukaryotes
one03013  Nucleocytoplasmic transport
one03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115130705
   03008 Ribosome biogenesis in eukaryotes
    115130705
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    115130705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:one03019]
    115130705
   03009 Ribosome biogenesis [BR:one03009]
    115130705
   03016 Transfer RNA biogenesis [BR:one03016]
    115130705
   03036 Chromosome and associated proteins [BR:one03036]
    115130705
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:one04147]
    115130705
   04031 GTP-binding proteins [BR:one04031]
    115130705
Messenger RNA biogenesis [BR:one03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     115130705
Ribosome biogenesis [BR:one03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    115130705
  Pre-60S particles
    115130705
Transfer RNA biogenesis [BR:one03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    115130705
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     115130705
   Spindle formation proteins
    115130705
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115130705
GTP-binding proteins [BR:one04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    115130705
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RNA_helicase AAA_24 G-alpha Gtr1_RagA Pox_A32 ArgoMid AAA_7 Septin AAA_16 AAA_22 TsaE DUF5906 SRPRB AAA_33
Other DBs
NCBI-GeneID: 115130705
NCBI-ProteinID: XP_029517953
LinkDB
Position
LG6:complement(39117917..39122426)
AA seq 215 aa
MAEGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKY
NVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCG
NKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPA
LAPPEILMDPSLAAQYEHDLKVASETALPDEDDDL
NT seq 648 nt   +upstreamnt  +downstreamnt
atggcagaaggcgagccacaggtccagttcaagcttgtgttggttggcgatggaggaacg
ggaaagactactttcgtcaaaagacatttgacgggagagtttgagaagaaatatgttgcc
actctgggagtggaggtgcacccgctggtcttccacactaacagaggggccatcaaatac
aacgtgtgggacacagccgggcaggagaaatttggagggctccgagacggctactacatc
caagcccagtgtgcgatcatcatgtttgacgtcacgtctcgagtcacctacaagaacgta
cccaactggcatcgtgacctggtgcgtgtctgtgagaacattcccatagtcctctgcggc
aacaaggtggacatcaaagaccgtaaagtcaaagccaagagcatcgtattccatcgcaag
aagaacctccagtactatgacatctctgctaagagtaattacaactttgagaagcccttc
ctgtggctagcgcggaagctgattggagaccccaacctggagtttgtggccatgcccgcc
ctcgcccccccagagatcctcatggacccctccctcgccgcgcagtacgagcacgacctc
aaagttgcatcagaaacagcgctcccagatgaagatgatgacctttaa

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